ginkgobioworks / shepardLinks
Automating the creation of batch processing workflows in AWS!
☆48Updated 3 years ago
Alternatives and similar repositories for shepard
Users that are interested in shepard are comparing it to the libraries listed below
Sorting:
- ☆15Updated last month
- This guidance creates a scalable environment in AWS to prepare genomic, clinical, mutation, expression and imaging data for large-scale a…☆24Updated last year
- ☆38Updated 2 years ago
- ParallelClusterMaker is a command line toolkit for automating the creation and destruction of AWS ParallelCluster stacks.☆15Updated 5 years ago
- This solution provides a framework for Next Generation Sequencing (NGS) genomics secondary-analysis pipelines using AWS Step Functions an…☆39Updated last year
- This project contains the webapp sample integrated with AWS HealthOmics, which allows users such as admin and bioinformaticians to operat…☆19Updated 7 months ago
- Amazon Web Services Operator Interface☆68Updated 4 months ago
- AWS Quick Start Team☆24Updated 8 months ago
- Image and VM management for Jenkins, Spark and Mesos clusters in EC2☆22Updated 4 years ago
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆69Updated 2 months ago
- ☆33Updated last week
- Manage AWS ParallelCluster through an easy to use web interface☆66Updated 2 years ago
- 1-Click Cluster Deployment with AWS ParallelCluster☆29Updated 2 years ago
- Example usage of the Benchling API: https://docs.benchling.com/☆33Updated 2 weeks ago
- Software sets up and runs an genome sequencing analysis workflow using AWS Batch and AWS Step Functions.☆201Updated 5 years ago
- ☆21Updated 2 weeks ago
- Genomics Workflows on AWS☆146Updated last year
- repository-based plasmid design☆29Updated 2 years ago
- The AWS Biotech Blueprint Multi Account is a landing zone for life sciences startups looking to build well architected research environme…☆32Updated 3 years ago
- Infrastructure template and Jupyter notebooks for running RoseTTAFold on AWS Batch.☆22Updated 3 years ago
- ☆75Updated 3 weeks ago
- simple jobs submission via command-line for AWS batch☆80Updated 6 years ago
- Research and Engineering Studio (RES) is an AWS supported open source product that enables IT administrators to provide an easy-to-use we…☆95Updated 3 months ago
- The WES API is a standard way to run and manage portable workflows.☆85Updated 8 months ago
- ☆78Updated 3 weeks ago
- Dockerfiles to build Biopython instances☆28Updated 8 years ago
- ☆147Updated last year
- ☆18Updated 8 months ago
- Hummingbird: Efficient Performance Prediction for Executing Genomic Applications in the Cloud: https://doi.org/10.1093/bioinformatics/bta…☆21Updated 11 months ago
- Job Manager API and UI for interacting with asynchronous batch jobs and workflows.☆26Updated last week