Lab notebook for people who like the command line.
☆11Mar 6, 2026Updated 4 months ago
Alternatives and similar repositories for exmemo
Users that are interested in exmemo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A basic science lab framework aimed at reproducibility and lab management.☆15May 22, 2026Updated 2 months ago
- 🎯 Generate DNA sequences with specified amino acid, codon, and k-mer frequencies☆17Jan 23, 2023Updated 3 years ago
- Library for visualising genomic features in Python.☆16May 12, 2017Updated 9 years ago
- Python for Command Line Oneliners☆19Jan 5, 2015Updated 11 years ago
- Library for indexing VCF files for random access searches by rsID☆17Mar 2, 2026Updated 4 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Copy number estimation of highly duplicated sequences☆10Aug 15, 2017Updated 8 years ago
- Given a set of kmers (fasta format) and a set of sequences (fasta format), this tool will extract the sequences containing the kmers.☆21Oct 20, 2023Updated 2 years ago
- ☆19Jul 15, 2026Updated last week
- A light-weight HTML lab notebook generator☆18Jun 16, 2023Updated 3 years ago
- A comprehensive and intelligent clinical phasing tool☆14Dec 3, 2022Updated 3 years ago
- Python data explorer.☆12Dec 13, 2024Updated last year
- Index and query k-mer matrices in BGZF☆12Apr 30, 2018Updated 8 years ago
- Python package used to convert Jupyter Noteboks into Jekyll ready documents including validation and version control tagging☆21May 15, 2018Updated 8 years ago
- Percentile-normalization method for correcting batch effects in case-control studies☆12Oct 26, 2019Updated 6 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Anno is a variant annotation tool☆24May 18, 2016Updated 10 years ago
- Code used for the single-cell RNA-Seq batch effects paper☆12Sep 25, 2017Updated 8 years ago
- Single-pass probabilistic duplicate marking of alignments with a Bloom filter.☆23Aug 7, 2023Updated 2 years ago
- A R package to create a minimal template for scientific manuscripts in .docx☆11Jan 15, 2022Updated 4 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 7 months ago
- Generate validation functions to make sure one object looks like another (its exemplar)☆10Dec 3, 2023Updated 2 years ago
- Assessing the increase in power from increasing read depth in a given RNA-Seq study☆14May 13, 2019Updated 7 years ago
- A thorough, straightforward, un-intimidating introduction to Gaussian processes in NumPy.☆16Jun 12, 2018Updated 8 years ago
- Template for a computational lab notebook using bookdown☆13Mar 16, 2018Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A small library for ranges/intervals, for use with genomic data.☆17Nov 27, 2012Updated 13 years ago
- a toolset for fast DNA read set matching and assembly using a new type of reduced kmer☆36Aug 4, 2021Updated 4 years ago
- A lightweight, alignment-free utility for detecting repeat-containing reads in short-read WGS, WES and RNA-seq data.☆19Jan 16, 2026Updated 6 months ago
- An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵☆28Jul 14, 2026Updated last week
- dead Simple Queue - Slurm arrays for files with jobs in them.☆25Apr 13, 2026Updated 3 months ago
- Arduino library for 3D vectors and quaternions.☆16Jul 23, 2023Updated 3 years ago
- ☆28Dec 22, 2025Updated 7 months ago
- Conveniently issue messages, warnings, and errors☆12Jul 7, 2021Updated 5 years ago
- ☆12May 9, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- R Package for making a directory of presentations☆15Dec 10, 2018Updated 7 years ago
- ☆12May 16, 2022Updated 4 years ago
- Python bindings to minimap2☆16Sep 18, 2017Updated 8 years ago
- NMEA 2000 style CAN battery monitor☆11Jun 22, 2017Updated 9 years ago
- Correction of palindromes in long reads from PacBio and Nanopore☆14Mar 1, 2022Updated 4 years ago
- CLI to automate Nextflow pipeline testing☆13Dec 15, 2025Updated 7 months ago
- zsh plugin to list up EC2 instances and ssh login the instances.☆12Jun 12, 2026Updated last month