andrewhaoyu / CTSLEB
A multi-ancestry polygenic risk score approach
☆14Updated 4 months ago
Related projects ⓘ
Alternatives and complementary repositories for CTSLEB
- Cross-population fine-mapping☆27Updated 2 weeks ago
- Colocalization analysis of genetic association signals☆47Updated this week
- MMQTL is a statistical package applying meta-analysis to detect multiple QTL signals integrating signals among conditions, with control f…☆10Updated 2 years ago
- Enhanced version of the FastQTL QTL mapper☆56Updated last year
- ☆24Updated 4 years ago
- An R package for performing MetaSTAAR procedure in whole-genome sequencing studies☆21Updated last week
- ☆33Updated 3 years ago
- Statistical fine-mapping pipeline in FinnGen☆26Updated last week
- Fast, integrative fine mapping with functional data☆55Updated 5 years ago
- MultiSuSiE is a multi-ancestry extension of the Sum of Single Effects model☆12Updated 2 weeks ago
- ☆64Updated 2 years ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆29Updated 10 months ago
- ☆42Updated 3 weeks ago
- A tool to plot significant regions of GWAS☆29Updated last year
- Mediated Expression Score Regression (MESC)☆26Updated 2 years ago
- harmonization, liftover, and imputation of summary statistics from GWAS☆32Updated 4 years ago
- codes used in the human kidney eQTL(cf) and eQTL(ci) and snATAC-seq data☆19Updated 3 years ago
- The tutorial for performing single-/multi-trait association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVOR…☆26Updated 3 months ago
- TWAS-pipeline☆21Updated 3 years ago
- An accurate and efficient HLA imputation method.☆26Updated last year
- FOCUS: Fine-mapping Of CaUsal gene Sets☆44Updated last year
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆31Updated last month
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Updated last year
- ☆17Updated 8 months ago
- A powerful TWAS framework leveraging summary-level reference data☆21Updated 10 months ago
- Make LocusZoom-like plots with your own LD matrix.☆38Updated 2 years ago
- Manhattan++☆26Updated 9 months ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆40Updated 6 years ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆45Updated 3 weeks ago
- Regional association plots☆25Updated 7 months ago