Alternatives and similar repositories for CTSLEB:

Users that are interested in CTSLEB are comparing it to the libraries listed below

• xinhe-lab / ctwas
  package for the causal TWAS project
  ☆41Updated this week
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆46Updated 6 months ago
• Marijn-Schipper / FLAMES
  FLAMES: Accurate gene prioritization in GWAS loci
  ☆34Updated 2 months ago
• anastasia-lucas / hudson
  An R package for creating mirrored Manhattan plots
  ☆18Updated 2 years ago
• getian107 / SuSiEx
  Cross-population fine-mapping
  ☆35Updated 5 months ago
• andreyshabalin / MatrixEQTL
  Matrix eQTL: Ultra fast eQTL analysis via large matrix operations
  ☆79Updated last year
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆52Updated 5 months ago
• MalteThodberg / awesome-multitrait-gwas
  List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS
  ☆31Updated 2 weeks ago
• clagiamba / moloc
  ☆35Updated 4 years ago
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆44Updated last year
• variani / finemapr
  Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF
  ☆31Updated last year
• leelabsg / SKAT
  Sequence kernel association test (SKAT)
  ☆49Updated 2 months ago
• douglasyao / mesc
  Mediated Expression Score Regression (MESC)
  ☆26Updated 2 years ago
• thewonlab / H-MAGMA
  ☆32Updated last year
• hakyimlab / summary-gwas-imputation
  harmonization, liftover, and imputation of summary statistics from GWAS
  ☆31Updated 4 years ago
• wuyangf7 / OPERA
  This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…
  ☆35Updated 7 months ago
• xqwen / dap
  software package for integrative genetic association analysis
  ☆34Updated last year
• jinghuazhao / FM-pipeline
  A Fine-Mapping pipeline
  ☆19Updated 5 years ago
• yanglab-emory / TIGAR
  ☆21Updated last month
• xqwen / torus
  QTL Discovery using Annotations
  ☆24Updated 2 years ago
• RitchieLab / GWAS-QC
  Quality control steps for GWAS
  ☆21Updated last year
• xihaoli / MetaSTAAR
  An R package for performing MetaSTAAR procedure in whole-genome sequencing studies
  ☆23Updated 5 months ago
• FinucaneLab / pops
  ☆78Updated 2 years ago
• powellgenomicslab / onek1k_phase1
  Contains code to analyze the OneK1K data and perform eQTL mapping of 14 cell types
  ☆30Updated 3 years ago
• hakyimlab / gtex-gwas-analysis
  ☆22Updated 3 years ago
• brielin / Popcorn
  Software for estimating correlation of trait effect sizes across populations
  ☆46Updated 3 weeks ago
• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated last year
• jordanero / MultiSuSiE
  MultiSuSiE is a multi-ancestry extension of the Sum of Single Effects model
  ☆12Updated 2 months ago
• opentargets / genetics-sumstat-harmoniser
  Harmonise GWAS summary statistics against a reference VCF
  ☆41Updated 3 years ago
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆42Updated 7 years ago