Alternatives and similar repositories for topr:

Users that are interested in topr are comparing it to the libraries listed below

• clagiamba / moloc
  ☆34Updated 4 years ago
• variani / finemapr
  Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF
  ☆31Updated last year
• bogdanlab / focus
  FOCUS: Fine-mapping Of CaUsal gene Sets
  ☆44Updated last year
• atgu / ukbb_pan_ancestry
  Analyses conducting GWAS across the UKBB diverse superpopulations
  ☆50Updated 5 months ago
• myles-lewis / locuszoomr
  A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.
  ☆41Updated 3 weeks ago
• psoerensen / qgg
  Statistical tools for Quantitative Genetic Analyses
  ☆36Updated 2 weeks ago
• eQTL-Catalogue / eQTL-Catalogue-resources
  ☆46Updated 5 months ago
• xqwen / fastenloc
  Colocalization analysis of genetic association signals
  ☆51Updated 4 months ago
• opentargets / genetics-sumstat-harmoniser
  Harmonise GWAS summary statistics against a reference VCF
  ☆41Updated 3 years ago
• CBIIT / LDlinkR
  LDlinkR
  ☆58Updated 11 months ago
• Geeketics / LocusZooms
  Make LocusZoom-like plots with your own LD matrix.
  ☆39Updated 2 years ago
• leelabsg / SKAT
  Sequence kernel association test (SKAT)
  ☆46Updated last month
• jrs95 / gassocplot2
  Regional association plots
  ☆25Updated last year
• mkanai / ldsc-corrplot-rg
  corrplot of LDSC genetic correlation results
  ☆50Updated 3 years ago
• astheeggeggs / PHESANT
  PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank
  ☆18Updated 2 years ago
• RitchieLab / eQTpLot
  Visualization of Colocalization Between eQTL and GWAS Data
  ☆80Updated 2 years ago
• meyer-lab-cshl / plinkQC
  R package for quality control of plink genetic datasets
  ☆58Updated 2 months ago
• xinhe-lab / ctwas
  package for the causal TWAS project
  ☆41Updated last week
• anastasia-lucas / hudson
  An R package for creating mirrored Manhattan plots
  ☆18Updated 2 years ago
• gusevlab / fusion_twas
  methods for functional summary-based imputation
  ☆81Updated 2 years ago
• thewonlab / H-MAGMA
  ☆32Updated last year
• cgrace1978 / manhplot
  Manhattan++
  ☆28Updated last year
• xihaoli / STAAR
  An R package for performing STAAR procedure in whole-genome sequencing studies
  ☆92Updated last month
• EBISPOT / gwas-sumstats-harmoniser
  GWAS Summary Statistics Data Harmonisation
  ☆22Updated 2 months ago
• xqwen / torus
  QTL Discovery using Annotations
  ☆24Updated 2 years ago
• brielin / Popcorn
  Software for estimating correlation of trait effect sizes across populations
  ☆44Updated 2 years ago
• huwenboshi / hess
  Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.
  ☆42Updated 6 years ago
• weizhou0 / GATE
  ☆22Updated last year
• saigegit / SAIGE
  Development for SAIGE and SAIGE-GENE(+)
  ☆72Updated last week
• n-mounier / bGWAS
  R package to perform Bayesian Genome-Wide Association Studies
  ☆39Updated last year