totajuliusd / toprView external linksLinks
topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple phenotypes can be viewed simultaneously, over the entire genome (Manhattan plot) or in the more detailed regional view.
☆71Feb 1, 2026Updated last week
Alternatives and similar repositories for topr
Users that are interested in topr are comparing it to the libraries listed below
Sorting:
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 4 months ago
- ☆21Nov 15, 2024Updated last year
- GENI plots to visualise results from genome-wide association studies☆31Oct 14, 2024Updated last year
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆13Jul 2, 2025Updated 7 months ago
- CoMorMent-Containers☆36Dec 6, 2025Updated 2 months ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆59Feb 12, 2021Updated 5 years ago
- ☆13Jul 4, 2023Updated 2 years ago
- Fine-mapping with infinitesimal effects☆20May 27, 2025Updated 8 months ago
- Hypothesis Prioritisation in multi-trait Colocalization☆55Apr 8, 2024Updated last year
- SCALLOP-INF analysis☆20Oct 24, 2025Updated 3 months ago
- Discovery of genetic variants with shared effect across multiple phenotypes from GWAS summary statistics☆14Oct 27, 2023Updated 2 years ago
- Create Regional Association Plots☆13Sep 7, 2025Updated 5 months ago
- A collection of commonly used resources for complex trait genetics.☆36Updated this week
- Connecting GWAS summary data to analytical tools☆23Mar 25, 2024Updated last year
- ☆15Apr 20, 2021Updated 4 years ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆35Sep 26, 2024Updated last year
- Colocalization analysis of genetic association signals☆53Jun 13, 2025Updated 8 months ago
- Example for TWAS☆12Jan 23, 2022Updated 4 years ago
- Make LocusZoom-like plots with your own LD matrix.☆49Jul 17, 2022Updated 3 years ago
- FLAMES: Accurate gene prioritization in GWAS loci☆57Dec 16, 2025Updated last month
- A pure R implementation of locuszoom for plotting genetic data at genomic loci accompanied by gene annotations.☆53Mar 6, 2025Updated 11 months ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆38Apr 26, 2024Updated last year
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆276Updated this week
- Repository☆10Oct 23, 2024Updated last year
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆201Jul 6, 2023Updated 2 years ago
- Linking GWAS data to analytical tools in R☆152May 20, 2022Updated 3 years ago
- This repository contains scripts related to Surendran P, Stewart I et al. Nature Medicine 2022 "Rare and common genetic causes of chemica…☆18Jul 15, 2022Updated 3 years ago
- Repo for the R package coloc☆188Dec 4, 2025Updated 2 months ago
- Fine-mapping pipeline in R: FINEMAP, CAVIAR, PAINTOR, GCTA-COJO, ABF☆35Jun 17, 2025Updated 7 months ago
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆39Updated this week
- Every Gene Ever Annotated in published GWAS☆51Nov 28, 2022Updated 3 years ago
- ☆57Jan 16, 2025Updated last year
- An R package for phenotype generation and association testing for phenome wide associations studies (PheWAS)☆15Jul 11, 2024Updated last year
- Multi-Trait Genome-Wide Association Analysis☆19Dec 19, 2023Updated 2 years ago
- ☆20Sep 12, 2025Updated 5 months ago
- A tool to plot significant regions of GWAS☆29Jan 27, 2023Updated 3 years ago
- lhcMR☆26Mar 24, 2024Updated last year
- Main scripts and commands used to analyze goat population genetic and domestication☆19Mar 25, 2019Updated 6 years ago