topr is a collection of plotting functions for visualizing and exploring genetic association results. Association results from multiple phenotypes can be viewed simultaneously, over the entire genome (Manhattan plot) or in the more detailed regional view.
☆75Apr 26, 2026Updated 4 months ago
Alternatives and similar repositories for topr
Users that are interested in topr are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- An R package for plotting GWAS results from the GAPIT package☆14Updated this week
- Discovery of genetic variants with shared effect across multiple phenotypes from GWAS summary statistics☆16Oct 27, 2023Updated 2 years ago
- Cross-population fine-mapping☆46Dec 7, 2024Updated last year
- CoMorMent-Containers☆39Jun 8, 2026Updated 2 months ago
- Methods for converting eQTL summary statistics into TWAS SNP-weights☆15Jul 2, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- GENI plots to visualise results from genome-wide association studies☆32Oct 14, 2024Updated last year
- ☆21Nov 15, 2024Updated last year
- ☆13Jul 4, 2023Updated 3 years ago
- Hypothesis Prioritisation in multi-trait Colocalization☆60Apr 8, 2024Updated 2 years ago
- R package for performing high dimensional multi-trait colocalization analyses using GWAS summary data☆62Feb 12, 2021Updated 5 years ago
- ☆15Apr 20, 2021Updated 5 years ago
- Create Regional Association Plots☆13May 27, 2026Updated 3 months ago
- Connecting GWAS summary data to analytical tools☆24Mar 25, 2024Updated 2 years ago
- R package for processing of GWAS output☆17Jul 9, 2024Updated 2 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆10Jul 24, 2020Updated 6 years ago
- Every Gene Ever Annotated in published GWAS☆52Nov 28, 2022Updated 3 years ago
- Fine-mapping with infinitesimal effects☆20May 5, 2026Updated 3 months ago
- PUMICE: Prediction Using Models Informed by Chromatin conformations and Epigenomics☆12Oct 6, 2023Updated 2 years ago
- lhcMR☆26Mar 24, 2024Updated 2 years ago
- SCALLOP-INF analysis☆21Jul 7, 2026Updated last month
- Multi-Trait Genome-Wide Association Analysis☆21Dec 19, 2023Updated 2 years ago
- MA-FOCUS: Multi-Ancestry Fine-mapping Of CaUsal gene Sets☆43Apr 26, 2024Updated 2 years ago
- Repo for the R package coloc☆207Dec 4, 2025Updated 8 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Partitioning algorithm developed for LAVA☆17May 17, 2024Updated 2 years ago
- Python command line tool for Multi-Trait Analysis of GWAS (MTAG)☆214Jul 6, 2023Updated 3 years ago
- A collection of commonly used resources for complex trait genetics.☆46Jul 9, 2026Updated last month
- Cross-population polygenic prediction☆112Nov 13, 2025Updated 9 months ago
- Linking GWAS data to analytical tools in R☆158May 20, 2022Updated 4 years ago
- Software to perform multi-ancestry SNP fine-mapping on molecular data☆34Aug 7, 2026Updated 3 weeks ago
- Make LocusZoom-like plots with your own LD matrix.☆51Jul 17, 2022Updated 4 years ago
- ☆98Jul 21, 2025Updated last year
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆36Sep 26, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A Python package for handling and visualizing GWAS summary statistics. https://cloufield.github.io/gwaslab/☆306Aug 28, 2026Updated last week
- An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.☆41Feb 8, 2026Updated 6 months ago
- Estimates partitioned heritability and enrichment for gene sets in complex human traits.☆26Sep 12, 2025Updated 11 months ago
- Data and code for the Effector index☆14Oct 13, 2020Updated 5 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆29Sep 20, 2022Updated 3 years ago
- Colocalization analysis of genetic association signals☆62Jun 13, 2025Updated last year
- FLAMES: Accurate gene prioritization in GWAS loci☆66Aug 25, 2026Updated last week