A framework to build Software As A Service (SaaS) platforms for Nextflow pipelines.
☆17Sep 6, 2025Updated 10 months ago
Alternatives and similar repositories for cloudgene3
Users that are interested in cloudgene3 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- nf-test utility functions☆12May 22, 2026Updated 2 months ago
- This repository hosts a large collection of Nextflow snippets☆56Jan 26, 2025Updated last year
- ☆13Updated this week
- Automatically source dotenv files into your Nextflow scope☆10Mar 27, 2026Updated 3 months ago
- A Nextflow plugin to estimate the CO₂ footprint of pipeline runs.☆27Jul 10, 2026Updated last week
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Debug tool to watch objects/expressions while running an R script☆17Jul 25, 2018Updated 7 years ago
- Functionality for working with pipeline and sample sheet schema files in Nextflow pipelines☆56Jul 7, 2026Updated 2 weeks ago
- Params validation plugin for Nextflow pipelines☆48Aug 7, 2024Updated last year
- On-demand containers provisioning service☆58Updated this week
- Nextflow runs monitoring and organisation UI☆77Sep 20, 2024Updated last year
- A collection of Groovy classes that provide utility services to nextflow pipelines.☆13Oct 25, 2022Updated 3 years ago
- A proof of concept daisy-chaining Nextflow workflows☆34Mar 10, 2026Updated 4 months ago
- ☆19Jul 7, 2026Updated 2 weeks ago
- metabolomics/lipidomics data processing☆10Feb 17, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Test data to be used for automated testing with the nf-core pipelines☆164Updated this week
- Customer workshop materials☆19May 13, 2026Updated 2 months ago
- Workflow management with Nextflow and nf-core☆32Jan 21, 2025Updated last year
- Converts 'MultiQC' Reports into Tidy Data Frames☆19Apr 1, 2024Updated 2 years ago
- Command line tool for Wave containers provisioning service☆19Jul 14, 2026Updated last week
- ☆10Sep 11, 2020Updated 5 years ago
- Metro-map-style SVG diagrams from Mermaid graph definitions, designed for visualizing bioinformatics pipeline workflows☆15Updated this week
- Nextflow-powered MS-DIAL☆14May 30, 2026Updated last month
- expressions on VCFs☆93Mar 17, 2026Updated 4 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Stochastic Testing and Input Manipulation for Unbiased Learning Systems☆31Apr 30, 2026Updated 2 months ago
- spSeudoMap: cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data☆13Sep 29, 2024Updated last year
- ☆10Dec 15, 2024Updated last year
- A bioinformatics pipeline to phase and impute genetic data☆32Jul 6, 2026Updated 2 weeks ago
- A project to launch the galaxy docker image easily using ansible☆11Jan 22, 2020Updated 6 years ago
- Fast and scalable inference for single-cell differential gene expression of multiple patients☆15Jul 3, 2026Updated 2 weeks ago
- Code for the Brassica oleracea/rapa/napus genomic comparison☆16Apr 29, 2021Updated 5 years ago
- Cookiecutter profile for making a NextFlow-based bioinformatics tool☆17Jul 8, 2024Updated 2 years ago
- nf-core/references is a bioinformatics pipeline that build references, for multiple use cases☆21Jul 6, 2026Updated 2 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Test data for MultiQC.☆24May 12, 2026Updated 2 months ago
- Python implementation and field-tool for automated pipeline launching through Tower CLI (beta)☆36May 29, 2026Updated last month
- MemVerge Netflow Plugin☆16Jun 24, 2025Updated last year
- Workbench demo project: cross-analysis of AoU and UKB.☆15May 2, 2023Updated 3 years ago
- ☆14Jul 14, 2026Updated last week
- Code and simulations using interaction-LD score regression☆13Jul 2, 2024Updated 2 years ago
- Pipeline to fetch metadata and raw FastQ files from public databases☆196May 29, 2026Updated last month