☆32Jun 21, 2026Updated last month
Alternatives and similar repositories for fastQpick
Users that are interested in fastQpick are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆19Jun 3, 2026Updated last month
- Repository for the paper "The impact of package selection and versioning on single-cell RNA-seq analysis"☆21Nov 27, 2025Updated 7 months ago
- ☆12Aug 30, 2024Updated last year
- The Monod package fits CME models to sequencing data.☆35Apr 24, 2026Updated 3 months ago
- ☆31May 19, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆26Jun 9, 2026Updated last month
- expressions on VCFs☆93Mar 17, 2026Updated 4 months ago
- Identification of spatial homogeneous regions☆21Oct 6, 2025Updated 9 months ago
- ☆29Apr 13, 2026Updated 3 months ago
- Improved long-read assembly by preserving contained reads☆30Aug 22, 2024Updated last year
- Error correction of long reads☆16Jan 30, 2026Updated 5 months ago
- adaptive genome assembly using nanopore sequencing☆27Updated this week
- scVI extension for unspliced RNA☆15May 18, 2025Updated last year
- v2.x of the microassembly based somatic variant caller☆29Jun 30, 2026Updated 3 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A pipeline creation tool using Snakemake☆14Updated this week
- blastn2dotplots: multiple dot-plot visualizer☆28Sep 15, 2025Updated 10 months ago
- quickly filter fastq files by matching sequences to a set of regex patterns☆60Apr 18, 2026Updated 3 months ago
- Repository for the clone2vec python package☆24May 6, 2026Updated 2 months ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Nov 25, 2024Updated last year
- Single-pass probabilistic duplicate marking of alignments with a Bloom filter.☆23Aug 7, 2023Updated 2 years ago
- JTK -- a regional diploid genome assembler☆26Apr 22, 2026Updated 3 months ago
- Tools for working with agp files☆19Jun 26, 2025Updated last year
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆46Dec 8, 2025Updated 7 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- An community curated awesome list of tools, software, databases and other resources for working/analysing RNA Viruses☆24Aug 15, 2025Updated 11 months ago
- ☆13Jul 8, 2026Updated 2 weeks ago
- This tools counts the number of specific k-mers within sequence data. The counts can then be compare to other counts to determine to comp…☆32Nov 25, 2024Updated last year
- Minipoa: A minimizer-based method for fast and memory-efficient partial order alignment☆18May 23, 2026Updated 2 months ago
- De novo chromosome-level scaffolding and phasing tool using Hi-C☆30Nov 23, 2025Updated 8 months ago
- A nextflow pipeline for calling modifications in nanopore reads.☆16Jul 7, 2026Updated 2 weeks ago
- ☆13May 27, 2025Updated last year
- A collection of easy-to-use custom ggplot2-based functions for data exploration and analysis. Each function handles data preprocessing an…☆27Dec 23, 2025Updated 7 months ago
- Identify long STRs, VNTRs, satellite DNA and other low-complexity regions in a genome☆100Jan 28, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆19Jul 2, 2026Updated 3 weeks ago
- ☆20May 24, 2025Updated last year
- A chromosome-level polyploid phasing scaffolding tool☆18Updated this week
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated 11 months ago
- Multithreaded read analysis☆25May 24, 2026Updated 2 months ago
- A Rust-Based suite of utilities for ultra-fast genomic feature extraction☆43Dec 18, 2025Updated 7 months ago
- Compute the neighborhood consolidation matrix and identify SHRs☆14Jun 12, 2025Updated last year