RAHenriksen / NGSNGS
NGSNGS: Next generation simulator for next generation sequencing data
☆50Updated 5 months ago
Alternatives and similar repositories for NGSNGS:
Users that are interested in NGSNGS are comparing it to the libraries listed below
- Read, manipulate and visualize 'Pairwise mApping Format' data in R☆72Updated 4 years ago
- A catalogue of available long read sequencing data analysis tools☆78Updated last month
- Evolutionary Transcriptomics with R☆43Updated this week
- Generates an NCBI .tbl file of annotations on a genome.☆66Updated 7 years ago
- More realistic simulator for genomic DNA sequences from Illumina machines that achieves a similar k-mer spectrum as the original☆52Updated 2 years ago
- Filter SAM file for soft and hard clipped alignments☆48Updated 11 months ago
- Nanopore data analysis in R☆39Updated last year
- This repository hosts a large collection of Nextflow snippets☆57Updated 3 months ago
- Quickly calculate and visualize sequence coverage in alignment files☆99Updated 5 years ago
- Visualize whole genome alignments as linear maps☆72Updated 7 months ago
- catalog for long-read sequencing tools☆32Updated 2 years ago
- web documentation for Trinotate☆48Updated 2 years ago
- Params validation plugin for Nextflow pipelines☆48Updated 8 months ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆65Updated last month
- kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.☆39Updated last year
- Generate unique KMERs for every contig in a FASTA file☆48Updated 2 years ago
- ☆62Updated 4 years ago
- A reference viral database (RVDB)☆26Updated 6 years ago
- ☆39Updated 3 weeks ago
- Calculate GC% and GC deviation for circular genomes☆17Updated 4 years ago
- A bioinformatics tutorial demonstrating a best-practice workflow to review a flowcell's sequence_summary.txt☆30Updated 4 years ago
- Lima - Demultiplex Barcoded PacBio Samples☆66Updated last week
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- An efficient way to guess the library type of your RNA-Seq data.☆31Updated 2 years ago
- A collection of command line tools for working with sequencing data☆51Updated last week
- Rank-based Gene Ontology analysis of gene expression data☆41Updated 2 years ago
- LRSDAY: Long-read Sequencing Data Analysis for Yeasts☆31Updated last year
- A set of workflows written in Nextflow for Genome Annotation.☆45Updated 10 months ago
- Workflow to prepare high accuracy single molecule consensus sequences from amplicon data using unique molecular identifiers☆33Updated last year
- ☆35Updated 2 years ago