feifei9606 / Awesome-Bioinformatics-CNView external linksLinks
生物信息学软件，资源和工具库的精选列表
☆127Mar 19, 2022Updated 3 years ago
Alternatives and similar repositories for Awesome-Bioinformatics-CN
Users that are interested in Awesome-Bioinformatics-CN are comparing it to the libraries listed below
Sorting:
- ☆23Jul 29, 2025Updated 6 months ago
- Phylogenetic Analysis of Long Terminal Repeat Retrotransposons☆18Oct 4, 2022Updated 3 years ago
- De novo lncRNA discovery pipeline, re-write of PLAR in shell and awk☆10Aug 2, 2023Updated 2 years ago
- Analysis pipelines for QTL discovery and GWAS signals interpretation☆12Sep 3, 2024Updated last year
- Data visualization with R☆12Dec 12, 2020Updated 5 years ago
- 生信爱好者周刊（每周日发布）☆461Dec 29, 2025Updated last month
- Study of TE evolution in a population of genomes☆10Dec 11, 2023Updated 2 years ago
- Long Read Based SV Calling Tools Analysis☆14Mar 22, 2024Updated last year
- SANEFALCON (Single reAds Nucleosome-basEd FetAL fraCtiON): Calculating the fetal fraction for noninvasive prenatal testing based on genom…☆14Jun 5, 2020Updated 5 years ago
- 把生物信息的一些常用资源整理成一个生信导航网页。☆24Sep 6, 2025Updated 5 months ago
- Best practice RNA-Seq analysis pipeline for reference-based RNA-Seq analysis☆40May 17, 2021Updated 4 years ago
- SRF: Satellite Repeat Finder☆101Jan 8, 2024Updated 2 years ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆75Sep 4, 2024Updated last year
- Set of script for the paper on the cattle graph genome☆13Jan 10, 2023Updated 3 years ago
- Streamlined duo/trio analysis and pedigree haplotyping: from VCF to interactive HTML☆15Oct 30, 2024Updated last year
- Code repository for the T2T-Y paper☆24Jul 11, 2023Updated 2 years ago
- Custom tools to 'facilitate' BioNano Genomics data analysis☆34Oct 22, 2018Updated 7 years ago
- Repository☆10Oct 23, 2024Updated last year
- Structural variant caller for low-depth long-read sequencing data☆47Feb 5, 2026Updated last week
- Whole Genome Annotation Pipeline☆16Jun 20, 2025Updated 7 months ago
- A graph-based pipeline used to call/genotype snvs/indels/SVs from NGS data☆17Aug 30, 2025Updated 5 months ago
- Updated figures for "A benchmarking of WGS-based structural variant callers" paper☆27Apr 3, 2022Updated 3 years ago
- Copy number estimation and variant calling for duplicated genes using WGS.☆32Jan 27, 2026Updated 3 weeks ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- ☆16Apr 9, 2021Updated 4 years ago
- A genome annotation pipeline that use short and long sequencing reads alignments from animal genomes☆30Apr 10, 2024Updated last year
- FastRemap, a C++ tool for quickly remapping reads between genome assemblies based on the commonly used CrossMap tool. Link to paper: http…☆26Aug 24, 2022Updated 3 years ago
- Bash scripts and data used in pantranscriptomic paper☆24Oct 21, 2022Updated 3 years ago
- Repository for pipeline code☆26Feb 28, 2024Updated last year
- ☆34Aug 8, 2025Updated 6 months ago
- Detection and genotyping of structural variants☆20Oct 17, 2025Updated 4 months ago
- Small and simple scripts useful for various bioinformatics purposes e.g. extract sequences from fasta files, rename fasta files (prefix a…☆22Oct 21, 2025Updated 3 months ago
- Short reads aligner for NIPT/CNV☆16Oct 10, 2018Updated 7 years ago
- ☆20Feb 1, 2026Updated 2 weeks ago
- scripts for the project of seven thaliana genomes assembly☆42May 22, 2021Updated 4 years ago
- shared scripts in Lu Lab @ Tsinghua University☆14Nov 7, 2018Updated 7 years ago
- An R package for plotting GWAS results from the GAPIT package☆14Oct 9, 2025Updated 4 months ago
- Code used to process and analyze structural variants and short tandem repeat variants profiled in 719 deeply sequenced whole genomes as p…☆11Jun 25, 2019Updated 6 years ago
- ggplot2-based Manhattan plot☆12Oct 18, 2022Updated 3 years ago