xQTLbiolinks: an R package for integrative analysis with xQTL data
☆18Jan 29, 2026Updated 8 months ago
Alternatives and similar repositories for xQTLbiolinks
Users that are interested in xQTLbiolinks are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- xQTLbiolinks: a comprehensive and scalable tool for integrative analysis of molecular QTLs☆41Feb 8, 2025Updated last year
- Mapping 3′UTR alternative polyadenylation quantitative trait loci through population-scale transcriptomic and genomic data☆18Mar 15, 2023Updated 3 years ago
- Calculates allelic Fold Change (aFC) using standard input files for fastQTL.☆28Jun 30, 2022Updated 4 years ago
- Fast and Efficient Tool to Simulate Summary Statistics from Genome-Wide Association Studies☆12May 21, 2024Updated 2 years ago
- Workflow for performing cistrome-wide associations studies☆11Jul 25, 2022Updated 4 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Open4Gene, A Hurdle Model-based Method for Peak-to-Gene Linkage Analysis☆18Oct 4, 2026Updated 2 weeks ago
- This software tool implements the OPERA (omics pleiotropic association) method to test for combinatorial pleiotropic associations of mole…☆38Sep 26, 2024Updated 2 years ago
- Epigenomewide Association Studies (EWAS) with FUnctional Summary-based ImputatiON (FUSION)☆12Mar 24, 2023Updated 3 years ago
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆16Apr 28, 2025Updated last year
- Molecular QTL analysis protocol developed by ADSP Functional Genomics Consortium☆56Updated this week
- Codes for our NPNT paper at Nature Metabolism☆14Feb 9, 2024Updated 2 years ago
- Genomic Annotation in Livestock for positional candidate LOci☆14Feb 26, 2021Updated 5 years ago
- Connecting GWAS summary data to analytical tools☆24Mar 25, 2024Updated 2 years ago
- ☆27Aug 20, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- GS3, software for genomic prediction and whole genome Bayesian analysis☆10Dec 18, 2017Updated 8 years ago
- ☆26Jan 8, 2026Updated 9 months ago
- Mendelian Randomization Bayesian Model Averaging☆23Feb 21, 2023Updated 3 years ago
- A method which leverages scRNA-seq data to achieve two goals: (1) to infer the cell types in which the disease-associated genes manifest …☆29Sep 20, 2022Updated 4 years ago
- https://jinghuazhao.github.io/pQTLtools/☆24Jun 17, 2026Updated 4 months ago
- A step by step guide on how to use eMAGMA, an approach to conducting eQTL informed gene-based tests.☆75Feb 4, 2021Updated 5 years ago
- ☆27Jul 28, 2025Updated last year
- Helpful handful of programs, completely open-source and free☆11Mar 26, 2021Updated 5 years ago
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 9 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Visualization of Colocalization Between eQTL and GWAS Data☆90May 13, 2022Updated 4 years ago
- AlphaImpute2: pedigree- and population-based genotype imputation☆15Aug 24, 2026Updated last month
- ☆19May 15, 2025Updated last year
- CoMorMent-Containers☆40Jun 8, 2026Updated 4 months ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆89Apr 21, 2025Updated last year
- GWAS Summary Statistics Data Harmonisation☆31Aug 9, 2026Updated 2 months ago
- Perform cell-stratified MR analysis through integrating GWAS and QTL data☆38Jan 28, 2026Updated 8 months ago
- A software package that includes BayesCpi, BayesR, BayesRC, and two extensions of BayesRC to overlapping data: BayesRC+ and BayesRCpi☆16Feb 28, 2023Updated 3 years ago
- mcRigor: a statistical method to enhance the rigor of metacell partitioning in single-cell data analysis☆17Apr 8, 2026Updated 6 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- A collection of various utilities for GWAS summary statistics☆35May 14, 2024Updated 2 years ago
- Portable eQTL analysis and statistical fine mapping workflow used by the eQTL Catalogue☆64Sep 26, 2026Updated 3 weeks ago
- identifying disease critical cell types and programs from single cell RNAseq☆61May 30, 2022Updated 4 years ago
- Signed LD profile regression code☆20Aug 1, 2025Updated last year
- Tutorial for running Mendelian Randomization analysis using R☆38Apr 29, 2024Updated 2 years ago
- Here, we report telomere-to-telomere (T2T) gap-free genomes for domesticated pepper Capsicum annuum and wild relative Capsicum rhomboideu…☆13Feb 18, 2024Updated 2 years ago
- A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expr…☆11Jan 20, 2022Updated 4 years ago