☆14Apr 20, 2023Updated 2 years ago
Alternatives and similar repositories for FuSeq_WES
Users that are interested in FuSeq_WES are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ONCOCNV - a package to detect copy number changes in Targeted Deep Sequencing and Exome-seq data☆25Oct 30, 2025Updated 4 months ago
- Advanced plotting functions for CNV data generated by CNV-Seq and Control Freec☆13Aug 25, 2020Updated 5 years ago
- A tool to detect tissue- and cancer- specific epigenetic signatures in WGS data of liquid biopsies☆10Mar 30, 2023Updated 2 years ago
- ☆11May 26, 2023Updated 2 years ago
- ExomeDepth R package for the detection of copy number variants in exomes and gene panels using high throughput DNA sequencing data.☆78Jun 30, 2025Updated 8 months ago
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Example datasets for CNVkit (http://github.com/etal/cnvkit)☆23Aug 18, 2018Updated 7 years ago
- ☆55Jan 11, 2023Updated 3 years ago
- ☆12Apr 16, 2021Updated 4 years ago
- ☆17Jul 19, 2024Updated last year
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25May 2, 2018Updated 7 years ago
- Workflow for Sequenza, cellularity and ploidy☆27Aug 19, 2025Updated 7 months ago
- Nextflow pipeline for Mutect2 somatic variant calling best practices☆23Jun 14, 2024Updated last year
- ☆23Mar 20, 2024Updated 2 years ago
- Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer☆58Mar 20, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- Pipeline to detect HLA disruption from WES and RNAseq data☆22Feb 17, 2025Updated last year
- ClassifyCNV: a tool for clinical annotation of copy-number variants☆73Jun 26, 2023Updated 2 years ago
- Tumor Mutational Burden☆65Mar 17, 2026Updated last week
- a python extension of CNVnator -- a tool for CNV analysis from depth-of-coverage by mapped reads☆212Mar 16, 2026Updated last week
- Fast, accurate and simple to use command line tool for variant detection in NGS data.☆12Sep 3, 2019Updated 6 years ago
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆14Nov 9, 2023Updated 2 years ago
- cnv-seq with custom bugfix☆10Mar 23, 2013Updated 13 years ago
- A pipeline creation tool using Snakemake☆13Updated this week
- ☆18Apr 17, 2025Updated 11 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- A simplified pipeline for ctDNA sequencing data analysis☆37Sep 23, 2017Updated 8 years ago
- Performs BLAST on compressed proteomic data.☆17Jun 15, 2015Updated 10 years ago
- ☆17Feb 14, 2026Updated last month
- Expedite large-scale identification of CNVs within predefined genomic regions. Online app available for those with GP2 Tier 2 Access.☆12Mar 16, 2026Updated last week
- visualize CNV data from targeted capture based sequencing data☆35May 10, 2021Updated 4 years ago
- CLI to automate Nextflow pipeline testing☆12Dec 15, 2025Updated 3 months ago
- ☆25Aug 1, 2022Updated 3 years ago
- Mutation detection using GATK4 best practices and latest RNA editing filters resources. Works with both Hg38 and Hg19☆78Jan 13, 2026Updated 2 months ago
- Nextflow pipeline to convert VCF files into MAF files.☆10Dec 12, 2025Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ☆23Mar 12, 2026Updated 2 weeks ago
- ☆10Sep 14, 2023Updated 2 years ago
- Report reverse and ambiguous strand SNPs in GWAS data☆34May 15, 2019Updated 6 years ago
- Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data.☆27Nov 2, 2021Updated 4 years ago
- CNV Rapid Aberration Detection And Reporting☆12Mar 2, 2021Updated 5 years ago
- FastSMC is a method to quickly and accurately estimate pairwise identical-by-descent (IBD) regions in the genome. FastSMC estimates the a…☆14Sep 2, 2021Updated 4 years ago
- Data cleaning and exploration in Pandas via Jupyter notebook☆10Jun 17, 2019Updated 6 years ago