dohlee / metheorLinks
Ultrafast DNA methylation heterogeneity calculation from bisulfite alignments (Lee et al., PLOS Computational Biology. 2023)
☆48Updated 4 months ago
Alternatives and similar repositories for metheor
Users that are interested in metheor are comparing it to the libraries listed below
Sorting:
- trackplot is a tool for visualizing various next-generation sequencing (NGS) data, including DNA-seq, RNA-seq, single-cell RNA-seq and fu…☆99Updated last month
- pyJASPAR: A Pythonic interface to JASPAR transcription factor motifs☆34Updated 2 months ago
- A list of alternative splicing analysis resources☆46Updated 9 months ago
- ☆87Updated last month
- Analysis pipeline for the GUIDE-seq assay.☆29Updated 5 months ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆73Updated last month
- Merging paired-end reads and removing adapters☆46Updated 2 months ago
- ☆60Updated 5 months ago
- Quantification of transposable element expression using RNA-seq☆78Updated last year
- Full-length transcriptome splicing and mutation analysis☆85Updated last year
- Interactive multiscale visualization for structural variation in human genomes☆70Updated 2 weeks ago
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆50Updated 2 years ago
- Workflows for processing RNA data for germline short variant discovery with GATK v4 and related tools☆84Updated 4 years ago
- rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis☆63Updated 7 months ago
- Single cell Nanopore sequencing data for Genotype and Phenotype☆57Updated 7 months ago
- Pangolin is a deep-learning method for predicting splice site strengths.☆84Updated last year
- HemTools: a collection of NGS pipelines and bioinformatic analyses☆74Updated 3 weeks ago
- SingleCell Nanopore sequencing data analysis☆62Updated 7 months ago
- Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq☆87Updated last month
- A nextflow pipeline to perform state-of-the-art genome-wide association studies.☆76Updated 3 months ago
- REDItools are python scripts to investigate RNA editing at genomic scale.☆69Updated 5 months ago
- Concurrent identification of m6A and m5C modifications in individual molecules from nanopore sequencing☆42Updated last year
- Capturing protein-RNA interaction footprints from single-nucleotide CLIP-seq data☆32Updated 4 years ago
- A tool for accurately detecting actively translating ORFs from Ribo-seq data☆39Updated 11 months ago
- A Python library to visualize and analyze long-read transcriptomes☆64Updated 8 months ago
- Tool package to perform in-silico CRISPR analysis and assessment☆34Updated last month
- CADD scripts release for offline scoring. For more information about CADD, please visit our website☆90Updated 2 months ago
- optimization of ribosome P-site positioning in ribosome profiling data☆57Updated 10 months ago
- A continually expanding collection of RNA-seq tools☆53Updated 3 months ago
- Ultra-fast 5' and 3' demultiplexer☆28Updated last year