Ultrafast DNA methylation heterogeneity calculation from bisulfite alignments (Lee et al., PLOS Computational Biology. 2023)
☆52Aug 25, 2025Updated 10 months ago
Alternatives and similar repositories for metheor
Users that are interested in metheor are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Read level DNA methylation analysis of bisulfite converted sequencing data☆19Feb 23, 2026Updated 4 months ago
- A simple Bisulfite FastQ Read Simulator (BiQRS)☆13Jun 11, 2026Updated 3 weeks ago
- Tools for fiberseq data written in rust.☆69Jun 11, 2026Updated 3 weeks ago
- The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)☆39Aug 16, 2023Updated 2 years ago
- A rust wrapper for the spoa C++ partial order alignment library☆10Jun 11, 2025Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Cluster-based analysis of CpG methylation☆13Jan 11, 2024Updated 2 years ago
- Host depletion optimised for clinical metagenomic sequencing applications☆18May 18, 2026Updated last month
- allele specific DNA methylation haplotype region☆13Oct 18, 2023Updated 2 years ago
- Epigenetic cell-type deconvolution from Single-Cell Omic Reference profiles☆35Apr 4, 2025Updated last year
- tools for working with Bisulfite Sequencing data while preserving reads intrinsic dependencies☆193Apr 19, 2026Updated 2 months ago
- ☆13Aug 6, 2025Updated 11 months ago
- ☆10Oct 31, 2022Updated 3 years ago
- Singular Genomics Demultiplexing Tool☆16Mar 5, 2024Updated 2 years ago
- A (mostly) universal methylation extractor for BS-seq experiments.☆181Jun 21, 2024Updated 2 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Visualization tool for temporal clonal evolution.☆18Mar 13, 2020Updated 6 years ago
- An information-theoretic pipeline for methylation analysis of WGBS data☆24Apr 9, 2019Updated 7 years ago
- Differential methylation: Easy, Fast, Identification and ANnoTation☆19Dec 18, 2020Updated 5 years ago
- A segmentation approach to analyze DNA methylation patterns and identify differentially methylation regions from whole-genome datasets☆21Feb 16, 2026Updated 4 months ago
- JTK -- a regional diploid genome assembler☆26Apr 22, 2026Updated 2 months ago
- ☆42Apr 15, 2021Updated 5 years ago
- Drug Resistance Prediction with Reference Graphs☆21Oct 23, 2025Updated 8 months ago
- The official code implementation for DREAMwalk in Python.☆32Jul 28, 2023Updated 2 years ago
- A FASTA/FASTQ format parser library☆20Mar 1, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- deduplicate FASTA and FASTQ files☆23Feb 16, 2022Updated 4 years ago
- Tools for analyzing DNA methylation data☆46May 18, 2026Updated last month
- Jupyter notebook repository for reproducing analysis in "DNA Methylation Landscape of the Mouse Brain at Single-Cell Resolution"☆14Apr 1, 2020Updated 6 years ago
- Parallel Construction of Suffix Arrays in Rust☆26May 2, 2025Updated last year
- Kraken2 Server☆23Nov 24, 2025Updated 7 months ago
- Hidden Markov Model based Copy number caller☆20Dec 9, 2025Updated 6 months ago
- sunburst plots for taxonomy - working to update Krona☆44Sep 22, 2025Updated 9 months ago
- Python implementation of Combat for data harmonisation, allowing also to remove unwanted effects☆16Oct 30, 2023Updated 2 years ago
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Aug 10, 2025Updated 10 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆30Mar 1, 2026Updated 4 months ago
- A Bioconductor R package for detecting cell-to-cell variably methylated regions (VMRs) from single-cell bisulfite sequencing leveraging p…☆10Jul 13, 2025Updated 11 months ago
- ☆18Jan 29, 2025Updated last year
- Flexible, uncertainty-aware variant calling with parameter free filtration via FDR control.☆138Jun 22, 2026Updated last week
- UVC, a very accurate small-variant caller (https://doi.org/10.1093/bib/bbab458)☆14May 18, 2025Updated last year
- an API for intersections of genomic data☆148Mar 12, 2026Updated 3 months ago
- ☆14May 12, 2023Updated 3 years ago