asntech / pyjaspar
pyJASPAR: A Pythonic interface to JASPAR transcription factor motifs
☆25Updated 9 months ago
Alternatives and similar repositories for pyjaspar:
Users that are interested in pyjaspar are comparing it to the libraries listed below
- A list of alternative splicing analysis resources☆41Updated 2 months ago
- Notes on ChIP-seq and other-seq-related tools☆23Updated last week
- A continually expanding collection of RNA-seq tools☆47Updated 3 months ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆21Updated last year
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆21Updated last year
- ☆14Updated 2 years ago
- Inference of TCR motifs☆28Updated this week
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆27Updated 3 months ago
- Comparison of Adaptive Immune Receptor Repertoires☆26Updated last year
- Analysis pipeline for the GUIDE-seq assay.☆23Updated 5 months ago
- R package for the analysis of single-cell immune repertoires☆41Updated last month
- ☆26Updated 2 months ago
- ☆47Updated 2 years ago
- This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL☆55Updated last year
- A network-based approach for exon set enrichment☆15Updated 9 months ago
- A workflow for enhanced protein isoform detection through integration of long-read RNA-seq and mass spectrometry-based proteomics.☆42Updated 2 years ago
- Builds a PEP from SRA or GEO accessions☆46Updated 4 months ago
- Snakemake wrappers for bioinformatics.☆18Updated last year
- ☆19Updated 8 months ago
- Estimation of Promoter Activity from RNA-Seq data☆50Updated 2 years ago
- Easy and comprehensive biological network reconstruction and analysis☆26Updated 3 months ago
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆38Updated 6 years ago
- ☆42Updated 2 months ago
- Preprocesses and Aligns Run-On Sequencing (PRO/GRO/ChRO-seq) data from Single-Read or Paired-End Illumina Sequencing☆24Updated last month
- Epimap processing and analysis code repository☆33Updated 2 years ago
- Quantification of transposable element expression using RNA-seq☆64Updated 11 months ago
- ☆53Updated 3 years ago
- 🧬 Gene analysis toolkit based on R☆55Updated 2 weeks ago
- A set of Shiny apps to provide interactive enrichment analysis and exploration of results.☆28Updated this week
- ☆10Updated 5 years ago