Analysis pipeline for the GUIDE-seq assay.
☆30Aug 1, 2025Updated 8 months ago
Alternatives and similar repositories for guideseq
Users that are interested in guideseq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analysis pipeline for the GUIDE-seq assay.☆81Jun 14, 2023Updated 2 years ago
- Comprehensive design of CRISPR gRNAs for nucleases and base editors☆28Mar 6, 2026Updated last month
- edit distance sequence tags and helpers☆12Feb 4, 2021Updated 5 years ago
- Variant-aware CRISPR off-target nomination☆24Apr 22, 2026Updated last week
- Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"☆24Jul 2, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19May 26, 2024Updated last year
- Python package to interactively annotate histological images within a jupyter notebook☆18Oct 20, 2025Updated 6 months ago
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆337Updated this week
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆19Dec 19, 2024Updated last year
- ☆11Oct 7, 2025Updated 6 months ago
- ☆12Mar 27, 2026Updated last month
- Reproducible GSEA Benchmarking☆14Mar 26, 2026Updated last month
- Fit generalized linear models in python.☆28Mar 6, 2023Updated 3 years ago
- A comprehensive gene set function enrichment tool for multiple species.☆14Mar 23, 2020Updated 6 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Package to Score Sequences using Rule Set 3☆15Nov 10, 2025Updated 5 months ago
- Fast and accurate sequence demultiplexing☆30Mar 18, 2026Updated last month
- ☆23Apr 21, 2025Updated last year
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆42Mar 20, 2026Updated last month
- 将速铂下载工具进行封装，以便高效方便地批量下载SRA测序数据。☆11Sep 1, 2020Updated 5 years ago
- ☆17Apr 23, 2021Updated 5 years ago
- Essential Python skills for using transformers on Colab☆11May 13, 2022Updated 3 years ago
- FaStore - high-performance FASTQ files compressor☆19May 19, 2022Updated 3 years ago
- ☆15Oct 10, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Mostly useful scripts and files for processing MiSeq amplicon data☆18Jul 1, 2016Updated 9 years ago
- CRISPR Indel, base edit analysis☆11Aug 1, 2020Updated 5 years ago
- General notes and resources on how to analyze Spatial Transcriptomics data☆12Jun 20, 2023Updated 2 years ago
- ☆11Jan 2, 2021Updated 5 years ago
- ☆19Apr 6, 2026Updated 3 weeks ago
- This repository consists of scripts and workflows used for generating results, figures, and tables published in the article: Can Liu, And…☆15Feb 17, 2021Updated 5 years ago
- runjob is a program for managing a group of related jobs running on a compute cluster☆11Mar 13, 2026Updated last month
- This is the repository for the 2021 uq-bio Summer School☆12May 9, 2022Updated 3 years ago
- ☆13Sep 17, 2021Updated 4 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆16Feb 19, 2026Updated 2 months ago
- BEAVR: A Browser-based tool for the Exploration And Visualization of RNAseq data☆26Jan 24, 2022Updated 4 years ago
- A software tool for personalized and allele-specific CRISPR editing.☆18Feb 1, 2022Updated 4 years ago
- The integrated pipeline for Indel detection☆17Apr 29, 2018Updated 8 years ago
- ☆15Mar 6, 2025Updated last year
- Software for performing UDiTaS sequencing analysis.☆15Dec 22, 2022Updated 3 years ago
- Simplified R version handling☆33Jun 18, 2023Updated 2 years ago