Analysis pipeline for the GUIDE-seq assay.
☆30Aug 1, 2025Updated last year
Alternatives and similar repositories for guideseq
Users that are interested in guideseq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Comprehensive design of CRISPR gRNAs for nucleases and base editors☆32Jul 10, 2026Updated last month
- Variant-aware CRISPR off-target nomination☆28Updated this week
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Jul 22, 2026Updated 3 weeks ago
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆351Jul 30, 2026Updated last week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Oct 7, 2025Updated 10 months ago
- Identify cell barcodes from single-cell genomics sequencing experiments☆43Dec 14, 2021Updated 4 years ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆19Dec 19, 2024Updated last year
- ☆13Dec 23, 2021Updated 4 years ago
- Package to Score Sequences using Rule Set 3☆17Nov 10, 2025Updated 9 months ago
- Reproducible GSEA Benchmarking☆14May 14, 2026Updated 2 months ago
- Fast and accurate sequence demultiplexing☆30Mar 18, 2026Updated 4 months ago
- A comprehensive gene set function enrichment tool for multiple species.☆14Mar 23, 2020Updated 6 years ago
- Fit generalized linear models in python.☆28Mar 6, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆19Apr 6, 2026Updated 4 months ago
- ☆14Sep 17, 2021Updated 4 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆42Mar 20, 2026Updated 4 months ago
- 将速铂下载工具进行封装，以便高效方便地批量下载SRA测序数据。☆11Sep 1, 2020Updated 5 years ago
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆29Apr 2, 2026Updated 4 months ago
- CRISPR Indel, base edit analysis☆11Aug 1, 2020Updated 6 years ago
- 使用指令微调对大模型进行微调。☆11Jun 28, 2023Updated 3 years ago
- BEAVR: A Browser-based tool for the Exploration And Visualization of RNAseq data☆26Jan 24, 2022Updated 4 years ago
- This repository consists of scripts and workflows used for generating results, figures, and tables published in the article: Can Liu, And…☆15Feb 17, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆11Jan 2, 2021Updated 5 years ago
- Copy Number Methods for Detection and Genome Wide Association Tests☆23Nov 4, 2024Updated last year
- Software for performing UDiTaS sequencing analysis.☆15Dec 22, 2022Updated 3 years ago
- General notes and resources on how to analyze Spatial Transcriptomics data☆12Jun 20, 2023Updated 3 years ago
- A software tool for personalized and allele-specific CRISPR editing.☆18Feb 1, 2022Updated 4 years ago
- runjob is a program for managing a group of related jobs running on a compute cluster☆11Jul 26, 2026Updated 2 weeks ago
- Tool package to perform in-silico CRISPR analysis and assessment☆42Updated this week
- Code supporting the Protein Design Archive (PDA) database publication☆16Aug 4, 2026Updated last week
- Text-guided protein design☆94Jul 21, 2026Updated 3 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Simplified R version handling☆32Jun 18, 2023Updated 3 years ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆30Aug 20, 2024Updated last year
- ☆16Jul 9, 2026Updated last month
- ☆13Mar 12, 2020Updated 6 years ago
- Updated figures for "A benchmarking of WGS-based structural variant callers" paper☆27Apr 3, 2022Updated 4 years ago
- ☆17Oct 18, 2023Updated 2 years ago
- fastrgz is a fast and efficient gzip compression tool for sequencing data (FASTQ)☆31Jun 18, 2026Updated last month