Analysis pipeline for the GUIDE-seq assay.
☆30Aug 1, 2025Updated last year
Alternatives and similar repositories for guideseq
Users that are interested in guideseq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analysis pipeline for the GUIDE-seq assay.☆82Jun 14, 2023Updated 3 years ago
- Comprehensive design of CRISPR gRNAs for nucleases and base editors☆33Aug 13, 2026Updated last month
- Code for "Optimizing 5’UTRs for mRNA-delivered gene editing using deep learning"☆25Jul 2, 2024Updated 2 years ago
- This is the repository for the 2021 uq-bio Summer School☆13May 9, 2022Updated 4 years ago
- A Computational Workflow for Designing Libraries of sgRNAs for CRISPR-Mediated Base Editing, and much more☆19Jul 22, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Biostatistics 6301: Introduction to Statistical Computing☆14Aug 15, 2024Updated 2 years ago
- Finding patch of conserved amino acid sites in 3D structure☆14Apr 13, 2025Updated last year
- Python package to interactively annotate histological images within a jupyter notebook☆19Oct 20, 2025Updated 11 months ago
- Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments☆353Sep 10, 2026Updated last week
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆19Dec 19, 2024Updated last year
- ☆13Dec 23, 2021Updated 4 years ago
- ☆15Jun 22, 2026Updated 2 months ago
- Reproducible GSEA Benchmarking☆14May 14, 2026Updated 4 months ago
- Fast and accurate sequence demultiplexing☆30Mar 18, 2026Updated 6 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A comprehensive gene set function enrichment tool for multiple species.☆14Mar 23, 2020Updated 6 years ago
- Fit generalized linear models in python.☆28Mar 6, 2023Updated 3 years ago
- ☆19Apr 6, 2026Updated 5 months ago
- ☆14Sep 17, 2021Updated 5 years ago
- Toolkit for the design and analysis of amplicon sequencing experiments utilizing unique molecular identifiers (UMIs)☆42Mar 20, 2026Updated 6 months ago
- Essential Python skills for using transformers on Colab☆11May 13, 2022Updated 4 years ago
- ☆17Apr 23, 2021Updated 5 years ago
- On-Target and Off-Target Scoring Algorithms for CRISPR gRNAs☆31Apr 2, 2026Updated 5 months ago
- CRISPR Indel, base edit analysis☆11Aug 1, 2020Updated 6 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Marker Enrichment Modeling (MEM)☆13Nov 22, 2021Updated 4 years ago
- This repository consists of scripts and workflows used for generating results, figures, and tables published in the article: Can Liu, And…☆15Feb 17, 2021Updated 5 years ago
- ☆11Jan 2, 2021Updated 5 years ago
- Copy Number Methods for Detection and Genome Wide Association Tests☆23Nov 4, 2024Updated last year
- Software for performing UDiTaS sequencing analysis.☆15Dec 22, 2022Updated 3 years ago
- General notes and resources on how to analyze Spatial Transcriptomics data☆12Jun 20, 2023Updated 3 years ago
- A software tool for personalized and allele-specific CRISPR editing.☆18Feb 1, 2022Updated 4 years ago
- The integrated pipeline for Indel detection☆17Apr 29, 2018Updated 8 years ago
- runjob is a program for managing a group of related jobs running on a compute cluster☆11Jul 26, 2026Updated last month
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- fast webservices based query tool for large sets of genomic features☆26May 10, 2025Updated last year
- KroneckerBio modelling toolbox for systems biology☆16Jan 1, 2026Updated 8 months ago
- Scripts to run copynumber variation calls on tumor and normal BAM files using Varscan2☆31Apr 19, 2018Updated 8 years ago
- Text-guided protein design☆99Jul 21, 2026Updated 2 months ago
- Simplified R version handling☆32Jun 18, 2023Updated 3 years ago
- IRIS: Isoform peptides from RNA splicing for Immunotherapy target Screening☆30Aug 20, 2024Updated 2 years ago
- ☆16Jul 9, 2026Updated 2 months ago