WDL and CWL compiler for the DNAnexus platform
☆37Oct 1, 2026Updated last week
Alternatives and similar repositories for dxCompiler
Users that are interested in dxCompiler are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- FUSE filesystem for the DNAnexus storage system☆13Apr 24, 2026Updated 5 months ago
- Workflow Description Language compiler for the DNAnexus platform☆43Jun 29, 2023Updated 3 years ago
- DNAnexus platform client libraries☆111Oct 6, 2026Updated last week
- A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide☆13Updated this week
- A translator from WDL to CWL v1.2☆28Jun 24, 2026Updated 3 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Profile for provenance research object of a CWL workflow run☆20Dec 20, 2022Updated 3 years ago
- ☆20Nov 30, 2023Updated 2 years ago
- ClaMSA (Classify Multiple Sequence Alignments).☆13Nov 21, 2024Updated last year
- GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes☆50Jul 23, 2026Updated 2 months ago
- Patterns commonly encountered when writing CWL workflows☆26Mar 30, 2022Updated 4 years ago
- quick qc on long-read alignment files. Show read-length and depth distributions☆23Apr 24, 2026Updated 5 months ago
- Specification for the Workflow Description Language (WDL).☆857Sep 14, 2026Updated 3 weeks ago
- Should you cite this software?☆33Jul 2, 2020Updated 6 years ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Nov 17, 2021Updated 4 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Tutorials for app(let) developers:☆24Jul 16, 2024Updated 2 years ago
- ☆25Jun 30, 2023Updated 3 years ago
- A performant Kubernetes-based task executor for the Task Execution Service (TES) 1.1 specification.☆18Updated this week
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆39Apr 13, 2026Updated 6 months ago
- Create cwl workflows by writing a simple Python script☆39Apr 29, 2020Updated 6 years ago
- ☆11Oct 21, 2016Updated 9 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 10 months ago
- Regulatory Element Locus Intersection (RELI) Analysis☆14Jun 12, 2026Updated 4 months ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Nov 17, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Bioinformatics workflows developed for and used on the St. Jude Cloud project.☆45Updated this week
- GitHub action to setup singularity☆18Apr 11, 2023Updated 3 years ago
- Foundations for the Rust omics ecosystem.☆35Jul 23, 2026Updated 2 months ago
- Allele frequency filter app☆14May 4, 2022Updated 4 years ago
- ☆16Apr 2, 2024Updated 2 years ago
- Collection of bioinformatics-related WDL modules and pipelines☆27Updated this week
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆81Mar 25, 2025Updated last year
- ⚙️ Generate Components.js component files from TypeScript☆14Sep 28, 2026Updated 2 weeks ago
- A Rust-based, headless workflow execution framework supporting local, cloud, and HPC.☆61Updated this week
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A crate for working with genomics chain files.☆15Jul 20, 2026Updated 2 months ago
- A collection of reusable WDL tasks. Category:Other☆88Sep 29, 2026Updated 2 weeks ago
- Workflow Description Language developer tools & local runner☆207Sep 5, 2026Updated last month
- Documentation on new GWAS Summary Statistics Standard☆25Jun 26, 2026Updated 3 months ago
- RML-Core: Main features for RDF generation with RML☆17Apr 20, 2026Updated 5 months ago
- Simulate mutations in genomes☆15Jun 15, 2020Updated 6 years ago
- An adaptable Snakemake workflow which uses GATKs best practice recommendations to perform germline mutation calling starting with BAM fil…☆11Sep 17, 2021Updated 5 years ago