WDL and CWL compiler for the DNAnexus platform
☆37May 14, 2026Updated last week
Alternatives and similar repositories for dxCompiler
Users that are interested in dxCompiler are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- WDL tools for parsing, type-checking, and more☆28May 2, 2026Updated 3 weeks ago
- FUSE filesystem for the DNAnexus storage system☆13Apr 24, 2026Updated last month
- Workflow Description Language compiler for the DNAnexus platform☆43Jun 29, 2023Updated 2 years ago
- DNAnexus platform client libraries☆111Updated this week
- A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide☆13May 5, 2026Updated 2 weeks ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- A translator from WDL to CWL v1.2☆28Updated this week
- Lossless VCF compression☆21Mar 4, 2022Updated 4 years ago
- Profile for provenance research object of a CWL workflow run☆19Dec 20, 2022Updated 3 years ago
- ☆20Nov 30, 2023Updated 2 years ago
- Create WDL documentation using Markdown.☆29Nov 25, 2025Updated 5 months ago
- ClaMSA (Classify Multiple Sequence Alignments).☆13Nov 21, 2024Updated last year
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Nov 17, 2021Updated 4 years ago
- Patterns commonly encountered when writing CWL workflows☆26Mar 30, 2022Updated 4 years ago
- A crate for working with genomics chain files.☆15Mar 19, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Specification for the Workflow Description Language (WDL).☆850May 13, 2026Updated last week
- Should you cite this software?☆33Jul 2, 2020Updated 5 years ago
- ☆24Jun 30, 2023Updated 2 years ago
- Rust crates for working with Workflow Description Language (WDL) documents.☆62Sep 23, 2025Updated 8 months ago
- This is an example of OAuth 1 Server.☆16Feb 10, 2018Updated 8 years ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆39Apr 13, 2026Updated last month
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 5 months ago
- Bioinformatics workflows developed for and used on the St. Jude Cloud project.☆44May 13, 2026Updated last week
- ☆11Oct 21, 2016Updated 9 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Regulatory Element Locus Intersection (RELI) Analysis☆14Jan 22, 2021Updated 5 years ago
- [Experimental] Workflow Definition Language (WDL) to CWL☆28Nov 17, 2021Updated 4 years ago
- ☆15Apr 2, 2024Updated 2 years ago
- Allele frequency filter app☆14May 4, 2022Updated 4 years ago
- R package for UK Biobank data wrangling.☆22Apr 26, 2024Updated 2 years ago
- GitHub action to setup singularity☆18Apr 11, 2023Updated 3 years ago
- Workflow Description Language developer tools & local runner☆201May 17, 2026Updated last week
- Documentation on new GWAS Summary Statistics Standard☆24Nov 19, 2025Updated 6 months ago
- A collection of reusable WDL tasks. Category:Other☆89Apr 8, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Python utilities for CWL☆42Updated this week
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆80Mar 25, 2025Updated last year
- SIP Switch Widget for Android☆22Sep 27, 2022Updated 3 years ago
- Simulate mutations in genomes☆15Jun 15, 2020Updated 5 years ago
- Groho (গ্রহ) is a simulator for inter-planetary travel☆12Jul 15, 2020Updated 5 years ago
- X things you should take into consideration if you code for big data analysis☆23May 29, 2018Updated 7 years ago
- Portable MurmurHash Implementation☆12Feb 19, 2024Updated 2 years ago