Alternatives and similar repositories for fingerprint_maps:

Users that are interested in fingerprint_maps are comparing it to the libraries listed below

• ccagc / QDNAseq
  QDNAseq package for Bioconductor
  ☆49Updated 8 months ago
• gatk-workflows / gatk4-exome-analysis-pipeline
  This WDL pipeline implements data pre-processing and initial variant calling according to the GATK Best Practices for germline SNP and In…
  ☆52Updated 4 years ago
• KCCG / ClinSV
  Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data
  ☆67Updated 7 months ago
• GeneDx / scramble
  ☆39Updated 11 months ago
• PubuduSaneth / cnvScan
  CNV screening and annotation tool
  ☆25Updated 8 years ago
• Genotek / ClassifyCNV
  ClassifyCNV: a tool for clinical annotation of copy-number variants
  ☆61Updated last year
• bahlolab / bioinfotools
  Documenting usage and experience with bioinformatic tools
  ☆41Updated 9 years ago
• babelomics / SMAca
  SMN1 copy-number and sequence variant analysis from next generation sequencing data
  ☆22Updated last year
• RahmanTeam / DECoN
  ☆53Updated 2 years ago
• bcgsc / HLAminer
  ⛏ HLA predictions from NGS shotgun data
  ☆52Updated 3 weeks ago
• Illumina / Polaris
  Data and information about the Polaris study
  ☆53Updated 5 years ago
• ikalatskaya / ISOWN
  ☆46Updated 5 years ago
• SyntekabioTools / HLAscan
  ☆24Updated 5 years ago
• mhguo1 / TRAPD
  Burden testing against public controls
  ☆50Updated last year
• geocarvalho / sv-cnv-studies
  Relevant papers for CNV and SV approaches
  ☆94Updated 5 months ago
• SciLifeLab / TIDDIT
  TIDDIT - structural variant calling
  ☆74Updated last week
• parklab / ShatterSeek
  ☆68Updated last year
• mskcc / mutation-signatures
  Create mutation signatures from MAF's, and decompose them into Stratton signatures
  ☆60Updated 5 years ago
• Illumina / Pisces
  Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.
  ☆97Updated 2 years ago
• kylessmith / SomVarIUS
  Somatic variant identification from unpaired samples
  ☆15Updated 8 years ago
• FoundationMedicineInc / SGZ
  ☆41Updated last year
• walaj / VariantBam
  Filtering and profiling of next-generational sequencing data using region-specific rules
  ☆76Updated last year
• gavinha / TitanCNA
  Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer
  ☆97Updated 3 years ago
• girirajanlab / CN_Learn
  CN-Learn
  ☆29Updated 5 years ago
• hartwigmedical / pipeline5
  ☆21Updated this week
• ash9nov / CNV-calling-from-Target-panel-based-NGS-data
  Detection of CNVs (deletion/duplication) in target panel based NGS data
  ☆16Updated last year
• fritzsedlazeck / parliament2
  Runs a combination of tools to generate structural variant calls on whole-genome sequencing data
  ☆47Updated 4 years ago
• cphgeno / CNVbench
  Benchmarking of CNV calling tools
  ☆18Updated 5 years ago
• nf-core / oncoanalyser
  A comprehensive cancer DNA/RNA analysis and reporting pipeline
  ☆65Updated this week
• nygenome / Conpair
  Concordance and contamination estimator for tumor–normal pairs
  ☆58Updated 5 months ago