ding-lab / PanCan_snATAC_publicationLinks
☆20Updated last year
Alternatives and similar repositories for PanCan_snATAC_publication
Users that are interested in PanCan_snATAC_publication are comparing it to the libraries listed below
Sorting:
- Repository for the building, sharing and editing of scRNAseq pipelines for the Lung Cell Atlas☆39Updated 5 years ago
- ☆53Updated 2 years ago
- Trajectory inference across multiple conditions with condiments: differential topology, progression, differentiation, and expression☆29Updated last year
- ☆62Updated 2 years ago
- iterative clustering pipeline of big single cell datasets.☆36Updated 4 months ago
- A unified interface to spatial transcriptomics deconvolution tools☆45Updated last week
- ☆40Updated 2 years ago
- Collection of scripts for analysis of pan fetal immune atlas☆29Updated 3 years ago
- Aligning gene expression trajectories of single-cell reference and query systems☆80Updated 5 months ago
- scWGCNA☆61Updated 3 years ago
- scMEGA: Single-cell Multiomic Enhancer-based Gene regulAtory network inference☆44Updated last year
- Functions for single cell data analysis☆32Updated 4 years ago
- Code for a multimodal atlas of healthy and injured cell states and niches in the human kidney☆24Updated last year
- R package for pathway analysis in scRNA-seq data☆77Updated last year
- A manually curated database of literature-supported ligand-receptor interactions in human and mouse☆32Updated last year
- Functional Inference of Gene Regulation☆51Updated last year
- identifying disease critical cell types and programs from single cell RNAseq☆58Updated 3 years ago
- MERCI for tracing of mitochondrion transfer between single cancer and T cells☆26Updated last year
- ☆30Updated 8 months ago
- CellANOVA: Cell State Space Analysis of Variance for signal recovery in single cell batch integration☆54Updated last year
- Robust identification of perturbed cell types in single-cell RNA-seq data☆36Updated 2 months ago
- Gene group activity utility functions for Scanpy☆100Updated last year
- RNA-velocity informed embeddings for visualizing cellular trajectories☆44Updated 3 years ago
- Unsupervised Inference of Developmental Directions for Single Cells☆23Updated 2 years ago
- Spatial Cellular Estimator for Tumors☆60Updated 3 weeks ago
- ☆48Updated 3 months ago
- Code used to process the data of the HBCA project☆32Updated last year
- Estimation of Single-Cell Potency with Single Cell Entropy☆43Updated 2 years ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- FastIntegrate integrates thousands of scRNA-seq datasets and outputs batch-corrected values for downstream analysis☆23Updated last year