Genearlized mapping scripts for RNA-seq and Patch-seq data
☆19Sep 29, 2025Updated 7 months ago
Alternatives and similar repositories for scrattch.mapping
Users that are interested in scrattch.mapping are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- iterative clustering pipeline of big single cell datasets.☆39Sep 5, 2025Updated 8 months ago
- Code for the BRAIN Initiative Cell Census Network (BICCN) - RF1 Tilgner☆21May 1, 2024Updated 2 years ago
- Whole mouse brain snATAC seq analysis☆29Apr 18, 2025Updated last year
- Toolkit for metacell analysis☆23Aug 8, 2024Updated last year
- R package for pathway analysis in scRNA-seq data☆80Aug 17, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆11Jul 8, 2024Updated last year
- Hierarchical, iterative clustering for analysis of transcriptomics data in R☆120Aug 20, 2025Updated 9 months ago
- ☆21Aug 4, 2024Updated last year
- Code to reproduce analyses and figures for Kamath et al., 2022☆13May 5, 2022Updated 4 years ago
- General, open-standard schema for cell annotations☆16Jun 16, 2025Updated 11 months ago
- This repo is not maintained anymore, please refer to: https://github.com/rnacentre/BrainCellAtlas_reproducibility.☆19Sep 24, 2024Updated last year
- Single Cell Pretrained Regulatory network INference from Transcripts☆11Sep 17, 2024Updated last year
- Client to access ExperimentHub resources☆11Apr 29, 2026Updated 3 weeks ago
- Building Gene Sets and Mapping mFISH Data☆16Aug 20, 2025Updated 9 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A modular tool for proportion analysis in single-cell sequencing data☆25Feb 26, 2026Updated 2 months ago
- Robust identification of perturbed cell types in single-cell RNA-seq data