ddiem-ri-4D / epiTCRLinks
epiTCR: a highly sensitive predictor for TCR–peptide binding
☆11Updated last year
Alternatives and similar repositories for epiTCR
Users that are interested in epiTCR are comparing it to the libraries listed below
Sorting:
- R implementation of GLIPH (Grouping of Lymphocyte Interactions by Paratope Hotspots), an algorithm developed by Glanville et al to identi…☆22Updated 2 years ago
- Ultrafast TCR clustering algorithm based on geometric isometry☆68Updated 9 months ago
- ☆43Updated last year
- Whole mouse brain snATAC seq analysis☆27Updated 3 months ago
- Unified access to several second-generation deconvolution methods☆73Updated 3 weeks ago
- Highly specific clustering of T cell receptor CDR3s☆43Updated 3 years ago
- ☆30Updated 2 years ago
- Grouping of Lymphocyte Interactions by Paratope Hotspots☆95Updated 4 years ago
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆63Updated 3 weeks ago
- A docker image for single-cell analysis☆88Updated 6 months ago
- Code related to the Celligner manuscript☆46Updated 4 years ago
- This is the official repository for the Human Cell Atlas Heart project.☆29Updated 5 years ago
- ☆18Updated 3 years ago
- ☆48Updated 3 years ago
- flexible CDR based distance metrics☆66Updated 11 months ago
- Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens☆42Updated 2 years ago
- TENET is a tool for reconstructing gene regulatory networks from pseudo-time ordered single-cell transcriptomic data.☆40Updated 3 years ago
- Create cisTarget databases☆52Updated last month
- R package for the analysis of single-cell immune repertoires☆43Updated 5 months ago
- Mapping the Functional Landscape of TCR Repertoire☆34Updated 3 years ago
- Using TCR and expression for sequence embedding☆57Updated 6 months ago
- Identifying tumor cells at the single-cell level using machine learning☆48Updated 8 months ago
- polyApipe☆18Updated 5 months ago
- R package to access DoRothEA's regulons☆149Updated last year
- Single cell omics biology annotations☆51Updated 3 months ago
- code repository for Lagattuta et al. "Repertoire analyses reveal T cell receptor sequence features that influence T cell fate." Nat. Imm.…☆13Updated 6 months ago
- Software tools for the analysis of epitope-specific T cell receptor (TCR) repertoires (scroll down for the README)☆85Updated 3 years ago
- ☆28Updated last week
- PhyloVelo, Phylogeny-based transcriptomic velocity of single cells☆43Updated last year
- ☆60Updated 4 years ago