epiTCR: a highly sensitive predictor for TCR–peptide binding
☆16Aug 15, 2025Updated 9 months ago
Alternatives and similar repositories for epiTCR
Users that are interested in epiTCR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Sep 16, 2024Updated last year
- ☆12Mar 22, 2024Updated 2 years ago
- Implementation of the Regularized Nonlinear Acceleration algorithm☆13Oct 4, 2018Updated 7 years ago
- Generic TCR-epitope recognition prediction using CNN approach on both known and novel epitopes☆17May 22, 2023Updated 3 years ago
- Use an ensemble of variant callers to call variants from ATAC-seq data☆23May 14, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Python bindings for VE Offloading (VEO) for SX-Aurora Vector Engine☆17Dec 27, 2023Updated 2 years ago
- A flexible framework for nucleosome profiling of cell-free DNA☆31Jul 27, 2023Updated 2 years ago
- Fast and accurate in silico inference of HLA genotypes from RNA-seq☆159Aug 20, 2024Updated last year
- A Nextflow workflow for HLA typing using HLA-HD☆15Jul 3, 2024Updated last year
- Predict epigenetic age from DNA methylation data☆74Apr 9, 2026Updated last month
- ☆12Jun 28, 2024Updated last year
- Tutorial for STAR-Fusion, FusionInspector, and de novo reconstruction of fusion transcripts using Trinity☆14Nov 21, 2019Updated 6 years ago
- ERGO-II, an updated version of ERGO including more features for TCR-peptide binding prediction☆35Apr 1, 2022Updated 4 years ago
- In-silico method written in Python and R to determine HLA genotypes of a sample. seq2HLA takes standard RNA-Seq sequence reads in fastq f…☆52Aug 9, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Methods for clustering and analyzing high-throughput single cell immune cell repertoires (RepSeq)☆17Jun 28, 2025Updated 11 months ago
- Msuite2: integrated DNA methylation data analysis toolkit with enhanced performance☆10Jan 21, 2025Updated last year
- Clonotype Neighbor Graph Analysis☆96Apr 29, 2026Updated last month
- ☆10Jan 20, 2022Updated 4 years ago
- ☆13Aug 14, 2020Updated 5 years ago
- In-depth analysis of normalization and transformation methods for building coexpression networks from RNA-seq data.☆15Aug 4, 2023Updated 2 years ago
- Transcription Factor Co-Occurrence using Market Basket analysis☆17Jul 7, 2025Updated 10 months ago
- Processing and analysis of data coming from Illumina sequencing machines☆10Apr 16, 2026Updated last month
- Template for building a small workflow in Nextflow☆17May 2, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆15Sep 20, 2022Updated 3 years ago
- Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-…☆57May 11, 2026Updated 2 weeks ago
- Explaining the Markdown syntax for inquiring minds.☆11May 11, 2017Updated 9 years ago
- Annotation and Prediction of Oncogenic Gene Fusions in RNAseq☆12Feb 20, 2016Updated 10 years ago
- GitHub template repository for creating new barebones Nextflow pipelines, using the Arcadia-Science/nextflow-template cookiecutter templa…☆13Mar 21, 2023Updated 3 years ago
- Materials presented at the BiocNYC meet-up☆12Nov 29, 2018Updated 7 years ago
- A single-cell RNAseq differential expression analysis approach in case-control study☆10Mar 6, 2022Updated 4 years ago
- Workflow: Convert CONTROL-freec output to GISTIC2☆10Apr 20, 2021Updated 5 years ago
- ☆15Aug 9, 2024Updated last year
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Use batch balanced KNN (BBKNN) in R☆14Sep 9, 2025Updated 8 months ago
- R package for tissue-specific gene enrichment☆16Mar 10, 2022Updated 4 years ago
- ☆10Jul 13, 2022Updated 3 years ago
- A webtool for the clinical interpretation of CNVs in rare disease patients☆13Jun 10, 2022Updated 3 years ago
- Renko Strategy for freqtrade☆12May 24, 2023Updated 3 years ago
- alphafold FAPE loss☆10Sep 28, 2021Updated 4 years ago
- ☆11Oct 14, 2022Updated 3 years ago