Alternatives and similar repositories for gliph:

Users that are interested in gliph are comparing it to the libraries listed below

• phbradley / tcr-dist
  Software tools for the analysis of epitope-specific T cell receptor (TCR) repertoires (scroll down for the README)
  ☆79Updated 3 years ago
• kmayerb / tcrdist3
  flexible CDR based distance metrics
  ☆57Updated 6 months ago
• mhorlbeck / ScreenProcessing
  ☆64Updated last year
• antigenomics / vdjdb-db
  🗂️ [vdjdb.cdr3.net is up and running] Git-based TCR database storage & management. Submissions welcome!
  ☆134Updated this week
• phbradley / conga
  Clonotype Neighbor Graph Analysis
  ☆83Updated 5 months ago
• saezlab / dorothea
  R package to access DoRothEA's regulons
  ☆142Updated 11 months ago
• zktuong / dandelion
  dandelion - A single cell BCR/TCR V(D)J-seq analysis package for 10X Chromium 5' data
  ☆112Updated this week
• hbc / NGS_Data_Analysis_Course
  ☆23Updated 8 years ago
• Teichlab / tracer
  TraCeR - reconstruction of T cell receptor sequences from single-cell RNAseq data
  ☆126Updated last year
• asncd / MIMOSCA
  A repository for the design and analysis of pooled single cell RNA-seq perturbation experiments.
  ☆87Updated 5 years ago
• statbiophys / OLGA
  Compute generation probabilities of CDR3 amino acid and nucleotide sequences
  ☆50Updated 3 years ago
• Teichlab / embl-single-cell-course-2016
  Material for lecture at the EMBL Single Cell Course 2016
  ☆47Updated 8 years ago
• mikessh / vdjtools
  [REPLACED by https://github.com/antigenomics/mirpy] Post-analysis of immune repertoire sequencing data
  ☆133Updated 8 months ago
• ncborcherding / utility
  Collection of Tumor-Infiltrating Lymphocyte Single-Cell Experiments with TCR
  ☆83Updated 7 months ago
• BaderLab / CellAnnotationTutorial
  Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods
  ☆89Updated last year
• pachterlab / kallistobustools
  kallisto | bustools workflow for pre-processing single-cell RNA-seq data
  ☆117Updated 2 years ago
• broadinstitute / depmap_omics
  What you need to process the Quarterly DepMap-Omics releases from Terra
  ☆114Updated last week
• timoast / sinto
  Tools for single-cell data processing
  ☆122Updated 8 months ago
• pinellolab / scATAC-benchmarking
  Benchmarking computational single cell ATAC-seq methods
  ☆180Updated 4 years ago
• bioinfo-ibms-pumc / SCSA
  SCSA: cell type annotation for single-cell RNA-seq data
  ☆87Updated last year
• GfellerLab / EPIC
  Repository for the R package EPIC, to Estimate the Proportion of Immune and Cancer cells from bulk gene expression data.
  ☆79Updated last year
• rpolicastro / scProportionTest
  ☆60Updated last year
• riazn / bms038_analysis
  Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…
  ☆51Updated 7 years ago
• andrewrech / antigen.garnish
  ☆47Updated 2 years ago
• MarioniLab / EmbryoTimecourse2018
  Data and analysis scripts for our Embryo Timecourse paper.
  ☆67Updated 5 years ago
• mdozmorov / Immuno_notes
  Immunology-related bioinformatics data and tools
  ☆71Updated 9 months ago
• broadinstitute / Celligner_ms
  Code related to the Celligner manuscript
  ☆45Updated 4 years ago
• AllonMKlein / scrublet
  Detect doublets in single-cell RNA-seq data
  ☆85Updated 5 years ago
• LewisLabUCSD / Ligand-Receptor-Pairs
  Compendium of available lists of ligand-receptor pairs and surface-secreted protein interactions.
  ☆128Updated 2 years ago
• PierreBSC / Viral-Track
  ☆57Updated 4 years ago