hiclib / pastis
Poisson-based algorithm for stable inference of DNA Structure
☆35Updated 2 years ago
Alternatives and similar repositories for pastis:
Users that are interested in pastis are comparing it to the libraries listed below
- TADtool is an interactive tool for the identification of meaningful parameters in TAD-calling algorithms for Hi-C data.☆44Updated 2 years ago
- An Optimized Nested TAD caller for Hi-C data☆20Updated 3 years ago
- HiCorr: a Hi-C data bias-correction pipeline☆28Updated last year
- A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains☆40Updated 2 years ago
- code associated with crane-nature-2015, 10.1038/nature14450☆34Updated 9 years ago
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…