☆12Dec 28, 2019Updated 6 years ago
Alternatives and similar repositories for q2_metabolomics
Users that are interested in q2_metabolomics are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Oct 28, 2021Updated 4 years ago
- Archive: Data, scripts, and outputs for the Nat. Comm. paper "Analysis of Composition of Microbiomes with Bias Correction". Please check …☆36Oct 19, 2020Updated 5 years ago
- ☆13Feb 5, 2022Updated 4 years ago
- A pipeline for the identification of fungi in public metagenomics datasets☆18Nov 23, 2020Updated 5 years ago
- FishTaco (Functional Shifts Taxonomic Contributors) is a metagenomic computational framework that aims to identify the driver taxa of mic…☆24Jul 3, 2021Updated 5 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- The KEGGgraph package to parse KEGG pathways in R into graph objects☆16Sep 20, 2026Updated last week
- Tutorials☆15Apr 2, 2022Updated 4 years ago
- ☆15Mar 14, 2023Updated 3 years ago
- An R package for removing contamination from metabarcoding (e.g., microbiome) datasets post-sequencing☆21Oct 17, 2023Updated 2 years ago
- Single sample pathway analysis tools for omics data☆15Nov 9, 2024Updated last year
- On-instrument and post-acquisition targeted feature extraction☆13Updated this week
- Model-based Integration of Metabolite Observations and Species Abundances☆26Feb 21, 2020Updated 6 years ago
- Supporting material for "Processing and visualization of metabolomics data using R"☆20Jan 3, 2017Updated 9 years ago
- Identifying misassemblies via deep learning☆11May 1, 2024Updated 2 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Repeat-injection-based quality control, batch correction, exploration, & data cleaning.☆13Updated this week
- Functional Analysis of Metagenomes by Likelihood Inference☆17Sep 8, 2025Updated last year
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆33Aug 3, 2024Updated 2 years ago
- The tools that constitute a nontargeted LCMS metabolomics data processing pipeline, created and used by the Broad Institute Metabolomics …☆15Aug 25, 2026Updated last month
- ☆21Dec 15, 2020Updated 5 years ago
- A bioinformatic tool facilitating automated in-source fragmentation identification☆11Sep 6, 2022Updated 4 years ago
- MinPath (Minimal set of Pathways) is a parsimony approach for biological pathway reconstructions using protein family predictions, achiev…☆26Jun 9, 2021Updated 5 years ago
- Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host…☆26Aug 20, 2026Updated last month
- ☆43Oct 10, 2025Updated 11 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Tool for reliability assessment of omics peprocessing☆12Jan 13, 2026Updated 8 months ago
- ** Blood metabolome predicts gut microbiome α-diversity in humans**☆24Sep 23, 2019Updated 7 years ago
- BinaRena: Interactive Visualization and Binning of Metagenomic Contigs☆33Aug 22, 2024Updated 2 years ago
- An R package for the Monte Carlo simulation of sequence evolution☆19May 6, 2014Updated 12 years ago
- A visualization tool for Systems-Level Interactive Data Exploration☆13Jan 12, 2022Updated 4 years ago
- ☆18May 30, 2025Updated last year
- MetEx is a tool to extract and annotate metabolites from liquid chromatography–mass spectrometry data.☆18Nov 14, 2023Updated 2 years ago
- The nPYc-Toolbox defines objects for representing, and implements functions to manipulate and display, metabolic profiling datasets.☆25Jul 23, 2026Updated 2 months ago
- ☆15Apr 13, 2023Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Tutorial for STAR-Fusion, FusionInspector, and de novo reconstruction of fusion transcripts using Trinity☆14Nov 21, 2019Updated 6 years ago
- Sparse Cooccurence Network Investigation for Compositional data☆26Sep 9, 2026Updated 2 weeks ago
- 16S rRNA Sequencing Data from the Human Microbiome Project☆11May 14, 2026Updated 4 months ago
- Command line client and Python libraries for CosmosID API☆13Oct 28, 2025Updated 10 months ago
- Workflow for LC-MS feature analysis and spatial mapping☆20Jul 16, 2018Updated 8 years ago
- Please use mmgenome2 instead. Tools for extracting individual genomes from metagenomes☆27Aug 18, 2017Updated 9 years ago
- MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.☆17Mar 31, 2022Updated 4 years ago