Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens
☆45Feb 20, 2026Updated 2 months ago
Alternatives and similar repositories for tabula-sapiens
Users that are interested in tabula-sapiens are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆12Jun 11, 2023Updated 2 years ago
- Scripts used for the Differential NicheNet analyses in the Liver Atlas paper Guilliams et al., Cell 2022☆10Jan 12, 2022Updated 4 years ago
- Module 4 for HKU Single-cell Workshop☆12Jul 6, 2021Updated 4 years ago
- Assembly and Annotation of the Human Immune Health Atlas☆24Aug 28, 2025Updated 8 months ago
- Genomic sequence preprocessing toolkit☆13Jan 13, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆19Sep 29, 2021Updated 4 years ago
- ☆17Sep 28, 2022Updated 3 years ago
- Code for the identification step for CSI-Microbes☆31Nov 25, 2024Updated last year
- EcoTyper is a machine learning framework for large-scale identification of cell states and cellular ecosystems from gene expression data.☆236Mar 28, 2024Updated 2 years ago
- Code for single-cell eQTL analysis of memory T cell data in Nathan, et al. bioRxiv (2021)☆23Jul 6, 2023Updated 2 years ago
- Annotated sequence data☆11Feb 2, 2025Updated last year
- ☆114Sep 16, 2020Updated 5 years ago
- ☆45May 3, 2021Updated 5 years ago
- ☆13Dec 16, 2021Updated 4 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- UHCA☆11Jan 23, 2025Updated last year
- Tool to parse fasterq/fastq dump outputs for SRA scRNAseq data☆19Mar 7, 2024Updated 2 years ago
- ☆21Mar 4, 2024Updated 2 years ago
- R scripts to help with your flow cytometry analysis☆29Jun 17, 2022Updated 3 years ago
- Draft cell type definitions from data - candidates for inclusion in CL☆12Jul 8, 2025Updated 10 months ago
- A pipeline to identify pathogenic microorganisms from scRNA-seq raw data.☆31Sep 15, 2023Updated 2 years ago
- ☆48Apr 18, 2020Updated 6 years ago
- SCASA: Single cell transcript quantification tool☆23Nov 24, 2023Updated 2 years ago
- Collection of scripts for analysis of pan fetal immune atlas☆32Aug 11, 2022Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- detecting spatial patterns of allele-specific expression☆11May 22, 2024Updated last year
- Benchmarking analysis of data integration tools☆414Apr 27, 2026Updated last week
- Code repository for the snRNA-seq cross-tissue atlas project☆21Feb 22, 2022Updated 4 years ago
- ☆20Apr 8, 2025Updated last year
- ☆13Jun 6, 2024Updated last year
- Flexible and efficient tests for evidence of positive selection anywhere in the cancer genome.☆27Jul 30, 2022Updated 3 years ago
- ☆17Dec 18, 2023Updated 2 years ago
- SNV calling from single cell sequencing☆118Nov 11, 2024Updated last year
- Code used to create the core and extended GBmap, including downstream analyses (cell-cell interactions, spatial transcriptomics deconvolu…☆65Dec 7, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Tabula Muris Senis☆109Jun 5, 2023Updated 2 years ago
- ☆27Jul 2, 2024Updated last year
- Holds the code and data to reproduce the analyses of Danaher & Kim et a;, "Advances in mixed cell deconvolution enable quantification of …☆12Dec 8, 2021Updated 4 years ago
- A fast and accurate deconvolution algorithm based on regularized matrix completion algorithm (ENIGMA)☆27Jun 21, 2023Updated 2 years ago
- Examples analyses using the single-cell RNA-seq data from mouse cell atlases☆22Sep 16, 2019Updated 6 years ago
- This repository contains all code used for the Human Lung Cell Atlas project.☆61Aug 21, 2023Updated 2 years ago
- Efficiently compute robust markers across single-cell datasets☆13Apr 21, 2021Updated 5 years ago