czbiohub-sf / tabula-sapiensLinks
Single Cell Transcriptomics of 25 Human Organs to Create a Tabula Sapiens
☆42Updated last week
Alternatives and similar repositories for tabula-sapiens
Users that are interested in tabula-sapiens are comparing it to the libraries listed below
Sorting:
- scWGCNA☆61Updated 2 years ago
- Using TCR and expression for sequence embedding☆58Updated last week
- Gene regulatory network containing signed transcription factor-target gene interactions☆86Updated 2 months ago
- Functional Inference of Gene Regulation☆46Updated last year
- Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.☆63Updated last month
- Multi-omics profiling of peripheral immune system response to SARS-CoV-2 infection☆41Updated 3 years ago
- ☆30Updated 2 years ago
- Mapping the Functional Landscape of TCR Repertoire☆34Updated 3 years ago
- ☆39Updated 4 years ago
- Code to reproduce the analysis of "Decoding gene regulation in the mouse embryo using single-cell multi-omics""☆40Updated 2 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆87Updated last month
- This repository contains our CellTag workflow, as deployed in our 2018 Biddy et al., Nature paper.☆32Updated last year
- Unified access to several second-generation deconvolution methods☆73Updated 3 weeks ago
- A method to rapidly assess cell type identity using both functional and random gene sets☆39Updated 7 months ago
- scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics☆54Updated last year
- A tool that allows to get UMI counts from a single cell protein assay☆82Updated 4 months ago
- ☆41Updated 2 months ago
- Pan-Cancer Single Cell Classifier☆75Updated last year
- Analysis of cell-cell communication at single-cell resolution☆104Updated 11 months ago
- A R package for integrated scRNA-seq data analysis using the RPCI algorithm☆44Updated last year
- R implementation of GLIPH (Grouping of Lymphocyte Interactions by Paratope Hotspots), an algorithm developed by Glanville et al to identi…☆22Updated 2 years ago
- UniverSC: a flexible cross-platform single-cell data processing pipeline☆46Updated last year
- Inference of RNA velocity modules for prediction of cell fates and integration with spatial and regulatory models.☆79Updated 5 months ago
- NATMI: Network Analysis Toolkit for the Multicellular Interactions☆35Updated 4 years ago
- Gene group activity utility functions for Scanpy☆84Updated 8 months ago
- Create cisTarget databases☆52Updated 2 months ago
- Data and analysis scripts for our Embryo Timecourse paper.☆69Updated 5 years ago
- Single-Cell ENhancer Target gene mapping using multimodal data with ATAC + RNA☆77Updated 4 months ago
- Geometry-preserving random sampling☆89Updated 9 months ago
- ☆35Updated 5 months ago