Online platform to host your (Nextflow, Snakemake, ...) workflows with integrated result rendering.
☆28Mar 10, 2026Updated 3 months ago
Alternatives and similar repositories for macworp
Users that are interested in macworp are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Graph-based framework to manipulate and analyze cell lineages from cell tracking data☆24Jun 3, 2026Updated last week
- A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, i…☆31Mar 14, 2025Updated last year
- Teaching materials and outline for the Pasteur Bioimage Analysis vour☆16Jun 2, 2025Updated last year
- ☆15Apr 1, 2026Updated 2 months ago
- QA/QC pipeline for a MiSeq/HiSeq/Ion Torrent/assembly-only run☆12Dec 2, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Apr 4, 2025Updated last year
- A place to collect information used in lectures, demos, workshops, etc.☆17Sep 26, 2024Updated last year
- A versatile pairwise aligner for genomic and spliced nucleotide sequences☆24Sep 12, 2025Updated 9 months ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Jun 5, 2024Updated 2 years ago
- Fractal backend☆20Updated this week
- Read MRC format image files into napari using the mrcfile package from CCP-EM☆19May 17, 2024Updated 2 years ago
- scalable multiscale image pyramids in python☆29Jul 25, 2024Updated last year
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆22Mar 12, 2026Updated 3 months ago
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 3 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Jun 6, 2023Updated 3 years ago
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆39Jun 1, 2026Updated last week
- python tools for BigDataViewer☆23Dec 29, 2024Updated last year
- A nextflow pipeline for calling exome CNVs☆14May 28, 2026Updated 2 weeks ago
- serve Zarr datasets via HTTP☆31Jun 12, 2023Updated 3 years ago
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 11 months ago
- ☆15Mar 17, 2026Updated 2 months ago
- Quick useful examples of data science & ML & big data☆16Jun 12, 2023Updated 3 years ago
- Gene Ontology subgraph visualizations☆20Jan 6, 2026Updated 5 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Pydantic models for OME-NGFF☆24Sep 14, 2025Updated 8 months ago
- Python utility and library for converting Nikon .nd2 files to pyramidal OME TIFF.☆12May 13, 2022Updated 4 years ago
- A nextflow pipeline for calling and annotating small germline variants from short DNA reads for WES and WGS data☆13Updated this week
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated last month
- Robust and reusable Executor for joblib☆21May 13, 2026Updated 3 weeks ago
- ☆27Mar 30, 2026Updated 2 months ago
- ☆11Jun 2, 2026Updated last week
- Teaching materials for improving research software writing abilities.☆14Apr 16, 2026Updated last month
- ☆26May 2, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆17May 14, 2026Updated 3 weeks ago
- A pipeline to identify (and remove) certain sequences from raw genomic data. Default taxon to identify (and remove) is Homo sapiens. Remo…☆24Apr 30, 2026Updated last month
- Remote (network) control robotics and vision automation standard☆17May 12, 2026Updated last month
- dask empowered fast4dreg☆16Mar 11, 2026Updated 3 months ago
- Swift Phenotypic Analysis of Cells☆10Jun 8, 2025Updated last year
- Spatial Tumor Microenvironment (SpatialTME) database is a comprehensive database designed for characterize tumor spatial microenvironment…☆13Dec 4, 2023Updated 2 years ago
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆127Updated this week