Alternatives and similar repositories for macworp

Users that are interested in macworp are comparing it to the libraries listed below

• nextflow-io / hyperopt
  Nextflow pipeline for hyperparameter optimization of machine learning models
  ☆23Updated last year
• ncbi / pm4ngs
  Project Manager for NGS data analysis
  ☆30Updated 2 years ago
• nf-core / setup-nextflow
  A GitHub action to install Nextflow
  ☆18Updated this week
• fulcrumgenomics / guide-counter
  A better, faster way to count guides in CRISPR screens.
  ☆31Updated last month
• seqeralabs / wave
  On-demand containers provisioning service
  ☆39Updated this week
• manzt / pygv
  a minimal, scriptable genome browser for python
  ☆51Updated 4 months ago
• mckennalab / Circuitseq
  Nanopore Plasmid Sequencing
  ☆32Updated last year
• 10XGenomics / rust-pseudoaligner
  Single-Cell RNA-seq pseudo-aligner
  ☆51Updated last year
• MultiQC / test-data
  Test data for MultiQC.
  ☆22Updated 2 weeks ago
• fulcrumgenomics / prymer
  Python Primer Design Library
  ☆13Updated last month
• mragsac / BISB-Bootcamp-2021
  FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program
  ☆19Updated 3 years ago
• althonos / lightmotif
  A lightweight platform-accelerated library for biological motif scanning using position weight matrices.
  ☆47Updated 2 weeks ago
• goodwright / nextflow.py
  Python wrapper around Nextflow.
  ☆59Updated 3 weeks ago
• clara-parabricks-workflows / parabricks-nextflow
  Accelerated genomics workflows in NextFlow
  ☆34Updated 8 months ago
• dputhier / pygtftk
  A python package and a set of shell commands to handle GTF files
  ☆48Updated 10 months ago
• sebriois / biomart
  Python biomart API
  ☆65Updated last year
• seqeralabs / wave-showcase
  Examples showing how to configure Nextflow to run with Wave containers provisioning service
  ☆21Updated 6 months ago
• higlass / higlass-python
  Python bindings to and Jupyter Notebook+Lab integration for the HiGlass viewer
  ☆59Updated 2 weeks ago
• pinellolab / CRISPRme
  ☆21Updated last week
• COMBINE-lab / simpleaf
  A rust framework to make using alevin-fry even simpler
  ☆54Updated 2 weeks ago
• dnanexus / wdlTools
  WDL tools for parsing, type-checking, and more
  ☆25Updated last month
• conda-incubator / conda-env-builder
  Build and maintain multiple custom conda environments all in one place.
  ☆38Updated 5 months ago
• dbikard / genomenotebook
  A genome browser in your Jupyter notebook
  ☆31Updated this week
• marcelm / dnaio
  Efficiently read and write sequencing data from Python
  ☆63Updated last month
• statbiophys / SONIA
  Infer selection pressures on features of amino acid CDR3 sequences.
  ☆25Updated last year
• gladstone-institutes / Interactive-Enrichment-Analysis
  A set of Shiny apps to provide interactive enrichment analysis and exploration of results.
  ☆28Updated last month
• merfishtools / merfishtools
  MERFISHTools implement a Bayesian framework for accurately predicting gene or transcript expression from MERFISH data. On top, they provi…
  ☆14Updated 5 years ago
• stjudecloud / workflows
  Bioinformatics workflows developed for and used on the St. Jude Cloud project.
  ☆36Updated this week
• scikit-bio / scikit-bio-tutorials
  Interactive tutorials for using scikit-bio in biological research
  ☆25Updated 10 months ago
• JEFworks-Lab / MERmaid
  WebGL-based viewer for spatially-resolved transcriptomics data
  ☆26Updated 2 years ago