Accelerated genomics workflows in NextFlow
☆43Sep 11, 2024Updated last year
Alternatives and similar repositories for parabricks-nextflow
Users that are interested in parabricks-nextflow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Accelerated genomics workflows in the Workflow Description Language☆37Apr 3, 2026Updated 2 months ago
- Applying IDR analysis to Homer peaks.☆16May 8, 2020Updated 6 years ago
- A bioinformatics best-practice processing and quality control pipeline for Xenium and Artera data☆38Updated this week
- Pan gGnome Viewer☆10Jul 10, 2025Updated 11 months ago
- An online database of variants functionally demonstrated to affect (or not affect) splicing.☆11Updated this week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Allele frequency filter app☆14May 4, 2022Updated 4 years ago
- ☆10May 31, 2022Updated 4 years ago
- ☆14Dec 2, 2022Updated 3 years ago
- A Nextflow pipeline for genome and pan-genome annotation☆16Feb 22, 2026Updated 4 months ago
- ☆17May 22, 2023Updated 3 years ago
- Finding cryptic relationships to boost disease gene detection☆12May 31, 2023Updated 3 years ago
- ☆17Apr 6, 2023Updated 3 years ago
- Interactive and integrated analysis of multiplexed tissue microarrays☆15Jun 15, 2026Updated last week
- AirLift is a tool that updates mapped reads from one reference genome to another. Unlike existing tools, It accounts for regions not shar…☆28May 23, 2024Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Toolkit for automated and rapid discovery of structural variants☆24Aug 24, 2023Updated 2 years ago
- An Fast variant calling tool to detection germline and somatic variants☆12Feb 21, 2026Updated 4 months ago
- Reducing reference bias using multiple population reference genomes☆34May 27, 2024Updated 2 years ago
- A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region exp…☆27Apr 17, 2026Updated 2 months ago
- ☆22Jun 12, 2023Updated 3 years ago
- 🧬 High-performance VCF file parser and reformatter with VEP annotation support. Converts complex VCF files to analyzable TSV format …☆45Aug 15, 2025Updated 10 months ago
- This repository contains the code developed for the NanOlympicsMod project.☆12Jan 29, 2024Updated 2 years ago
- HTSlib bindings for Ruby☆11Jun 19, 2026Updated last week
- heuristics to merge structural variant calls in VCF format.☆38Oct 6, 2016Updated 9 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Convert vcf in parquet☆32Jan 23, 2025Updated last year
- Influenza genome analysis Nextflow workflow☆26Jun 3, 2026Updated 3 weeks ago
- Indel caller for DNA-seq or RNA-seq☆16Aug 8, 2023Updated 2 years ago
- Class to view Alphafold models☆11Jan 20, 2023Updated 3 years ago
- RCK: Reconstruction of clone- and haplotype-specific Cancer Karyotypes☆18Apr 2, 2020Updated 6 years ago
- A Nextflow workflow for HLA typing using HLA-HD☆15Jul 3, 2024Updated last year
- Oxford Nanopore HDF/Fast5 to CRAM conversion tool☆22Dec 30, 2019Updated 6 years ago
- Tutorials covering various topics in genomic data analysis.☆17Nov 29, 2018Updated 7 years ago
- Code for fuzzy monkeys.☆15Apr 29, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- StrVCTVRE, a structural variant classifier for exonic deletions and duplications☆19Dec 6, 2023Updated 2 years ago
- ☆17Sep 14, 2023Updated 2 years ago
- MemVerge Netflow Plugin☆16Jun 24, 2025Updated last year
- Sequence Bloom Trees with All/Some split☆11Oct 30, 2018Updated 7 years ago
- Scalable genomic analysis pipelines, written in WDL☆12Jun 2, 2026Updated 3 weeks ago
- Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-☆34Sep 20, 2019Updated 6 years ago
- building a human pangenome from the HPRCy1v2 genbank accessioned assemblies☆15Feb 13, 2023Updated 3 years ago