ialbert / genescape-centralLinks
Gene Ontology subgraph visualizations
☆20Updated last year
Alternatives and similar repositories for genescape-central
Users that are interested in genescape-central are comparing it to the libraries listed below
Sorting:
- A Generative Pre-Trained Transformer Package for Pangenomes☆52Updated 4 months ago
- Splice junction analysis and filtering from BAM files☆42Updated 3 years ago
- cgat-apps repository☆34Updated 5 months ago
- fastest GTF/GFF-to-BED converter chilling around☆27Updated last month
- visual analysis of your VCF files☆36Updated 2 years ago
- Functional annotation pipeline for proteins from non-model organisms implemented in Nextflow☆18Updated 3 years ago
- ☆17Updated last month
- PhyloCSF++ computes PhyloCSF tracks for whole-genome multiple sequence alignments, scores single MSA, annotates CDS features in GFF/GTF f…☆30Updated 3 years ago
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆13Updated 9 years ago
- ✂️ Deep learning-based splice site predictor that improves spliced alignments☆54Updated 7 months ago
- Reference-guided multiple sequence alignment of viral genomes☆70Updated 3 months ago
- 🧬 MSABrowser: dynamic and fast visualization of sequence alignments, variations, and annotations☆34Updated last year
- Quality assessment of de novo transcriptome assemblies from RNA-Seq data☆24Updated 3 months ago
- Evolutionary Transcriptomics with R☆45Updated last week
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆44Updated 3 months ago
- Example of SGTK application for E.coli dataset:☆32Updated 5 years ago
- transXpress: a Snakemake pipeline for streamlined de novo transcriptome assembly and annotation☆27Updated last year
- fastq quality assessment and filtering tool☆18Updated 2 years ago
- genEra is a fast and easy-to-use command-line tool that estimates the age of the last common ancestor of protein-coding gene families.☆52Updated 9 months ago
- Fully automated generation of UCSC assembly hubs☆34Updated 11 months ago
- An efficient CLI to extract sequences from the SRA☆112Updated last month
- for visual evaluation of read support for structural variation☆54Updated last year
- SAMStat displays various properties of next-generation sequencing reads stored in SAM/BAM format.☆24Updated 2 years ago
- Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.☆38Updated 2 years ago
- Variant catalogue pipeline☆25Updated 4 months ago
- Automatically design multiplex PCR primer pairs for diverse templates☆30Updated last year
- Immuological gene typing and annotation for genome assembly☆38Updated 6 months ago
- tspex: tissue-specificity calculator☆32Updated 2 years ago
- A command line tool to compute mapping statistics from a BAM file☆24Updated 3 years ago
- Distribution of TEs and their relationship to genes in host genome☆23Updated 2 years ago