Read MRC format image files into napari using the mrcfile package from CCP-EM
☆19May 17, 2024Updated last year
Alternatives and similar repositories for napari-mrcfile-reader
Users that are interested in napari-mrcfile-reader are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- automated on-the-fly tilt-series alignment☆11Jul 6, 2021Updated 4 years ago
- SerialEM mdoc files as pandas dataframes☆14Feb 4, 2026Updated 2 months ago
- ☆19Dec 22, 2025Updated 3 months ago
- ☆17Oct 21, 2024Updated last year
- Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.☆30Apr 2, 2026Updated 2 weeks ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- A tool for creating and analyzing panoramic views of biological membranes in electron tomograms.☆16Mar 4, 2023Updated 3 years ago
- A Matlab script for deconvolving the CTF in single micrographs/tomograms with a Wiener-like filter☆12Jun 26, 2019Updated 6 years ago
- IMOD model files as pandas dataframes in Python☆12Jun 26, 2025Updated 9 months ago
- cryo-EM tomogram simulator☆30Apr 8, 2026Updated last week
- a tool for using surfaces to explore volumetric data in napari☆19Feb 25, 2026Updated last month
- PyTom software for cryo-tomogram processing☆45Jan 5, 2026Updated 3 months ago
- Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.☆34Mar 16, 2026Updated last month
- Parallel cryo electron tomography via beam image shift☆42Apr 4, 2026Updated 2 weeks ago
- Template for creating a new python repository☆13Sep 28, 2025Updated 6 months ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- ArtiaX is an open-source extension of the molecular visualisation program ChimeraX.☆43Mar 11, 2025Updated last year
- Cookiecutter for napari plugins☆73Nov 6, 2024Updated last year
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 9 months ago
- Generate multifunctional and macro recordable GUIs from Python classes☆45Apr 2, 2026Updated 2 weeks ago
- Complementary tools for Relion tomo☆12Mar 9, 2024Updated 2 years ago
- Conventions for 3DEM software packages☆19Feb 22, 2022Updated 4 years ago
- ☆55Aug 19, 2024Updated last year
- A software for membrane signal subtraction to facilitate high-resolution cryo-EM reconstruction of membrane proteins embedded in their na…☆12Sep 4, 2025Updated 7 months ago
- cryo-ET particle picking by representation and metric learning☆44Nov 24, 2025Updated 4 months ago
- Serverless GPU API endpoints on Runpod - Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- TomoNet is a GUI based pipeline package focusing on cryoET and STA data processing☆21Mar 12, 2026Updated last month
- Jupyter-based tool for membrane segmentation manipulation☆10Jul 9, 2025Updated 9 months ago
- Pipeline for the automatic detection and segmentation of particles and cellular structures in 3D Cryo-ET data, based on deep learning (co…☆41Jan 30, 2024Updated 2 years ago
- STAR file I/O in Python☆56Nov 24, 2025Updated 4 months ago
- Singularity image for cryo-CARE☆38Jan 7, 2022Updated 4 years ago
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 3 years ago
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- ☆38Jun 22, 2023Updated 2 years ago
- A collaborative knowledge sharing platform for the cryo-ET community☆20Aug 7, 2024Updated last year
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- ☆10Mar 29, 2026Updated 2 weeks ago
- De novo analysis for cryo-electron tomography☆25Nov 8, 2024Updated last year
- Python scripts to manipulate Relion tomo STAR files and much more...☆15Mar 23, 2026Updated 3 weeks ago
- ☆14Oct 17, 2025Updated 6 months ago
- Scripts for aligning cryo-electron microscopy direct electron detector movies on whole movies or individual particle trajectories☆12Mar 28, 2017Updated 9 years ago
- Self-supervised learning for isotropic cryoET reconstruction☆90Dec 29, 2024Updated last year
- membrane segmentation in 3D for cryo-ET☆90Feb 27, 2026Updated last month