stephenturner / onelinersLinks
Useful bash one-liners for bioinformatics.
☆1,973Updated 2 years ago
Alternatives and similar repositories for oneliners
Users that are interested in oneliners are comparing it to the libraries listed below
Sorting:
- Unix, R and python tools for genomics and data science☆1,331Updated 2 months ago
- Bioinformatics containers☆762Updated 3 weeks ago
- Interactive lessons in bioinformatics.☆865Updated 4 years ago
- Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis inclu…☆1,401Updated 2 years ago
- Applied Computational Genomics Course at UU: Spring 2020☆1,062Updated last year
- RNAseq analysis notes from Ming Tang☆1,050Updated 4 years ago
- Supplementary files for my book, "Bioinformatics Data Skills"☆700Updated 7 years ago
- Collection of bioinformatics training materials☆1,077Updated 3 weeks ago
- resources for learning bioinformatics☆1,285Updated 10 months ago
- A list of useful bioinformatics resources☆618Updated 6 months ago
- Toolkit for processing sequences in FASTA/Q formats☆1,512Updated 5 months ago
- Aggregate results from bioinformatics analyses across many samples into a single report.☆1,391Updated this week
- RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.☆1,137Updated this week
- ChIP-seq analysis notes from Ming Tang☆830Updated last year
- Bioinformatics code libraries and scripts☆551Updated 3 months ago
- BWK awk modified for biological data☆632Updated 3 years ago
- Bioinformatics one liners from Ming Tang☆495Updated 5 years ago
- A curated list of nextflow based pipelines☆609Updated 4 months ago
- A list of interesting genome browser and genome visualization programs☆1,023Updated last week
- A cross-platform and ultrafast toolkit for FASTA/Q file manipulation☆1,482Updated 3 weeks ago
- A curated list of awesome Bioinformatics libraries and software.☆3,734Updated 8 months ago
- Python for Bioinformatics☆262Updated 5 years ago
- Bayesian haplotype-based genetic polymorphism discovery and genotyping.☆852Updated 5 months ago
- bedtools - the swiss army knife for genome arithmetic☆1,007Updated 8 months ago
- Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis☆1,019Updated last year
- Trinity RNA-Seq de novo transcriptome assembly☆876Updated 9 months ago
- The Leek group guide to genomics papers☆493Updated 7 years ago
- Incubator for useful bioinformatics code, primarily in Python and R☆635Updated 9 months ago
- Scripts to download genomes from the NCBI FTP servers☆1,046Updated 3 months ago
- A curated list of resources for learning bioinformatics.☆497Updated 3 years ago