stephenturner / oneliners

Related projects ⓘ

Alternatives and complementary repositories for oneliners

• crazyhottommy / getting-started-with-genomics-tools-and-resources
  Unix, R and python tools for genomics and data science
  ☆1,180Updated 4 months ago
• harvardinformatics / learning-bioinformatics-at-home
  resources for learning bioinformatics
  ☆831Updated 4 years ago
• BioContainers / containers
  Bioinformatics containers
  ☆687Updated this week
• applied-bioinformatics / An-Introduction-To-Applied-Bioinformatics
  Interactive lessons in bioinformatics.
  ☆806Updated 3 years ago
• jorvis / biocode
  Bioinformatics code libraries and scripts
  ☆503Updated last month
• crazyhottommy / bioinformatics-one-liners
  Bioinformatics one liners from Ming Tang
  ☆456Updated 4 years ago
• crazyhottommy / RNA-seq-analysis
  RNAseq analysis notes from Ming Tang
  ☆941Updated 3 years ago
• jdidion / biotools
  A list of useful bioinformatics resources
  ☆587Updated last year
• MultiQC / MultiQC
  Aggregate results from bioinformatics analyses across many samples into a single report.
  ☆1,229Updated this week
• arq5x / bedtools2
  bedtools - the swiss army knife for genome arithmetic
  ☆939Updated 4 months ago
• nf-core / rnaseq
  RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
  ☆920Updated 2 weeks ago
• quinlan-lab / applied-computational-genomics
  Applied Computational Genomics Course at UU: Spring 2020
  ☆945Updated 7 months ago
• nextflow-io / awesome-nextflow
  A curated list of nextflow based pipelines
  ☆572Updated 2 years ago
• griffithlab / rnaseq_tutorial
  Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis inclu…
  ☆1,339Updated last year
• sib-swiss / training-collection
  Collection of bioinformatics training materials
  ☆981Updated this week
• crazyhottommy / ChIP-seq-analysis
  ChIP-seq analysis notes from Ming Tang
  ☆752Updated 3 months ago
• deeptools / pyGenomeTracks
  python module to plot beautiful and highly customizable genome browser tracks
  ☆775Updated 4 months ago
• samtools / bcftools
  This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.gith…
  ☆680Updated this week
• cmdcolin / awesome-genome-visualization
  A list of interesting genome browser or genome-browser-like implementations
  ☆863Updated this week
• lh3 / seqtk
  Toolkit for processing sequences in FASTA/Q formats
  ☆1,395Updated 3 months ago
• vsbuffalo / bds-files
  Supplementary files for my book, "Bioinformatics Data Skills"
  ☆611Updated 6 years ago
• chapmanb / bcbb
  Incubator for useful bioinformatics code, primarily in Python and R
  ☆611Updated 9 months ago
• deeptools / deepTools
  Tools to process and analyze deep sequencing data.
  ☆684Updated this week
• freebayes / freebayes
  Bayesian haplotype-based genetic polymorphism discovery and genotyping.
  ☆790Updated 5 months ago
• MareesAT / GWA_tutorial
  A comprehensive tutorial about GWAS and PRS
  ☆836Updated last year
• trinityrnaseq / trinityrnaseq
  Trinity RNA-Seq de novo transcriptome assembly
  ☆837Updated 3 months ago
• mikelove / awesome-multi-omics
  List of software packages for multi-omics analysis
  ☆734Updated 6 months ago
• openbiox / awosome-bioinformatics
  A curated list of resources for learning bioinformatics.
  ☆451Updated 2 years ago
• OpenGene / fastp
  An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)
  ☆1,932Updated 2 weeks ago