Alternatives and similar repositories for AlphaFold2-IDR-complex-prediction:

Users that are interested in AlphaFold2-IDR-complex-prediction are comparing it to the libraries listed below

• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆56Updated 3 months ago
• tristanic / pae_to_domains
  Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix
  ☆35Updated 2 years ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆81Updated last year
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆53Updated 3 months ago
• steineggerlab / colabfold-protocol
  ColabFold protocol
  ☆50Updated 5 months ago
• psipred / DMPfold2
  Fast and accurate protein structure prediction
  ☆50Updated 2 months ago
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆32Updated 2 years ago
• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆71Updated this week
• eternagame / EternaFold
  Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
  ☆57Updated 8 months ago
• JudeWells / chainsaw
  ☆32Updated 5 months ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆34Updated last year
• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated last year
• lhatsk / AlphaLink
  AlphaLink: Integrating crosslinking MS data into OpenFold
  ☆66Updated last year
• PDB-REDO / AlphaBridge
  ☆32Updated last week
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆49Updated 2 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆49Updated 9 months ago
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆88Updated 8 months ago
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆31Updated last year
• kWeissenow / MutAmore
  Rendering protein mutation movies from predicted 3D structures
  ☆20Updated last year
• churchlab / low-N-protein-engineering
  Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".
  ☆57Updated 3 years ago
• MIDIfactory / AlphaFastPPi
  Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
  ☆35Updated 5 months ago
• frankligy / DeepImmuno
  Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity
  ☆66Updated last year
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆37Updated 2 years ago
• elaspic / elaspic2
  Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…
  ☆21Updated 3 years ago
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆89Updated last year
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆23Updated last year
• hendrixlab / bpRNA
  bpRNA: Large-scale Annotation and Analysis of RNA Secondary Structure
  ☆47Updated last year
• PDB-REDO / alphafill
  AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…
  ☆95Updated last month
• FPPGroup / CodonBERT
  CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.
  ☆35Updated 6 months ago