hgbrian / biomodalsLinks
bioinformatics tools running on modal
☆112Updated last month
Alternatives and similar repositories for biomodals
Users that are interested in biomodals are comparing it to the libraries listed below
Sorting:
- Sandbox for Deep-Learning based Computational Protein Design☆119Updated 2 weeks ago
- FAPLM: A Drop-in Efficient Pytorch Implementation of Protein Language Models☆156Updated 4 months ago
- Directed evolution of proteins in sequence space with gradients☆93Updated last month
- Improved antibody structure-based design using inverse folding☆144Updated 3 months ago
- Plugin for folding sequences directly in PyMOL☆108Updated 4 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆115Updated 6 months ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆66Updated 3 months ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆106Updated last month
- Codebase for Germinal, a broadly enabling generative pipeline for efficient generation of epitope-targeted de novo antibodies.☆165Updated 2 weeks ago
- Structure prediction of alternative protein conformations☆80Updated 9 months ago
- composite-objective protein design☆121Updated this week
- PLM based active learning model for protein engineering☆84Updated last year
- ☆71Updated last year
- Dataset and package for working with protein-protein interactions in 3D☆98Updated 7 months ago
- A model-context-protocol server for molecules.☆85Updated 7 months ago
- Lbster: Language models for Biological Sequence Transformation and Evolutionary Representation☆139Updated 2 weeks ago
- This repo contains the results data for Round 1 of Adaptyv Bio’s EGFR Protein Design Competition.☆34Updated 11 months ago
- ☆47Updated 11 months ago
- Metrics for our protein design competitions.☆35Updated last year
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Updated last week
- Protein Sequence Design with Deep Learning and Tooling like Monte Carlo Sampling and Analysis☆62Updated last month
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)…☆62Updated last month
- Learning Universal Representations of Intermolecular Interactions with ATOMICA☆191Updated 2 months ago
- ☆97Updated last week
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆89Updated 6 months ago
- ☆71Updated 8 months ago
- ☆107Updated last week
- MiniFold: Simple, Fast and Accurate Protein Structure Prediction☆77Updated 5 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆145Updated 7 months ago
- ☆92Updated last month