☆73Jan 23, 2026Updated last month
Alternatives and similar repositories for py2Dmol
Users that are interested in py2Dmol are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Colorblind-friendly, perceptually uniform palettes for chimerax☆14Sep 26, 2020Updated 5 years ago
- bakerlab pymol scripts☆26Feb 6, 2020Updated 6 years ago
- Image processing for cryo-electron microscopy in PyTorch☆13Apr 5, 2025Updated 11 months ago
- ☆110Mar 14, 2026Updated last week
- Precise Generation of Conformational Ensembles for Intrinsically Disordered Proteins with IDPFold☆26Sep 13, 2024Updated last year
- Finding patch of conserved amino acid sites in 3D structure☆13Apr 13, 2025Updated 11 months ago
- Disordered protein ensemble prediction☆13Feb 19, 2026Updated last month
- A convinent tool to visualize AlphaFold 3 prediction results with PyMOL and matplotlib☆19May 20, 2024Updated last year
- ☆15Jun 3, 2025Updated 9 months ago
- Homomer symmetry prediction from protein sequence☆43Mar 13, 2025Updated last year
- ☆21Oct 26, 2024Updated last year
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆50Dec 2, 2025Updated 3 months ago
- JAX translation of boltz☆25Aug 4, 2025Updated 7 months ago
- An open-source platform for developing protein models beyond AlphaFold.☆12Jul 15, 2025Updated 8 months ago
- Structural Quality Assessment for Biomolecular Structure Prediction Models☆89Feb 12, 2026Updated last month
- ☆11Mar 9, 2024Updated 2 years ago
- A package to create, visualize, and analysis PDB-derived pseudo-ensembles.☆10Jan 7, 2026Updated 2 months ago
- Python based Graphical User Interface for generating input files for and running molecular dynamic simulation.☆10Aug 27, 2024Updated last year
- ☆135Jun 3, 2025Updated 9 months ago
- User friendly and accurate binder design pipeline☆1,048Mar 13, 2026Updated last week
- [ICML 2024] Floating Anchor Diffusion Model for Multi-motif Scaffolding☆31Aug 23, 2024Updated last year
- Fast indexing and search of discontinuous motifs in protein structures☆127Feb 24, 2026Updated 3 weeks ago
- FuncFetch workflow scripts☆15Jun 9, 2025Updated 9 months ago
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆278Dec 10, 2024Updated last year
- A simplified implementation of DSSP algorithm for PyTorch and NumPy☆98Jun 9, 2025Updated 9 months ago
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆171Dec 24, 2023Updated 2 years ago
- composite-objective protein design☆282Updated this week
- Quantitative Estimate Index for Early-Stage Screening of Compounds Targeting Protein-Protein Interactions☆19Nov 28, 2023Updated 2 years ago
- Rapid Generation of Rare Event Pathways Using Direction Guided Adaptive Sampling: From Ligand Unbinding to Protein (Un)Folding☆38Nov 25, 2025Updated 3 months ago
- ☆242Feb 12, 2026Updated last month
- Explicit crosslinks in AlphaFold 3☆23Mar 17, 2025Updated last year
- VMD Audio/Text control with natural language☆19May 12, 2021Updated 4 years ago
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated last year
- Code for designing biased protein states☆73Feb 13, 2026Updated last month
- ☆52Jan 2, 2025Updated last year
- Colorblind-friendly, perceptually uniform palettes for pymol☆21Jan 25, 2021Updated 5 years ago
- ☆32Mar 2, 2026Updated 3 weeks ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆122Aug 3, 2025Updated 7 months ago
- Scripts for aligning cryo-electron microscopy direct electron detector movies on whole movies or individual particle trajectories☆12Mar 28, 2017Updated 8 years ago