adaptyvbio / competition_metrics
Metrics for our protein design competitions.
☆24Updated 4 months ago
Alternatives and similar repositories for competition_metrics:
Users that are interested in competition_metrics are comparing it to the libraries listed below
- ☆20Updated 4 months ago
- Efficient manipulation of protein structures in Python☆51Updated 3 months ago
- ☆41Updated 5 months ago
- ☆54Updated 10 months ago
- Official open-source of CarbonNovo: Joint Design of Protein Structure and Sequence Using a Unified Energy-based Model☆16Updated 3 months ago
- Code for humanization of antibody and nanobody☆35Updated 3 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆39Updated 3 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆34Updated 5 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆36Updated 3 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆43Updated 2 weeks ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆41Updated 2 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆27Updated 2 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆24Updated 7 months ago
- Source code and examples for AlphaFold Unmasked☆58Updated last week
- ☆33Updated 5 months ago
- ☆73Updated 2 weeks ago
- ☆26Updated 2 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆50Updated 6 months ago
- Efficient implementatin of ESM family.☆53Updated last month
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆69Updated last month
- Extension of ThermoMPNN for double mutant predictions☆24Updated last month
- ☆61Updated 2 months ago
- ☆31Updated last month
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆66Updated 4 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆65Updated 6 months ago
- Fast indexing and search of discontinuous motifs in protein structures☆19Updated last week
- KA-Search: Rapid and exhaustive sequence identity search of known antibodies☆22Updated 7 months ago
- ☆26Updated 2 years ago
- ☆24Updated 8 months ago
- ☆36Updated last year