Alternatives and similar repositories for FreeBindCraft

Users that are interested in FreeBindCraft are comparing it to the libraries listed below

• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆66Updated 2 months ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆66Updated 3 months ago
• Kuhlman-Lab / evopro
  ☆87Updated 2 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆66Updated 10 months ago
• LAnAlchemist / Pseudocycle_small_molecule_binder
  Small_molecule_binder_design_use_pseudocycles
  ☆20Updated 10 months ago
• mabr3112 / riff_diff_protflow
  ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.
  ☆34Updated 2 weeks ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆58Updated last week
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆64Updated last year
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆35Updated last year
• Jfeldman34 / AF3Complex
  ☆45Updated 3 months ago
• drhicks / Kejia_peptide_binders
  code for IDR binding paper 2025
  ☆55Updated 7 months ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆45Updated 10 months ago
• bene837 / af2seq
  ☆44Updated last year
• baker-laboratory / CA_RFDiffusion
  ☆72Updated 4 months ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆33Updated 2 weeks ago
• danny305 / StabilityOracle
  ☆28Updated last year
• ELELAB / RosettaDDGPrediction
  ☆76Updated 7 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆32Updated last year
• SLx64 / af3cli
  A command-line interface and Python library for generating AlphaFold3 input files.
  ☆37Updated 4 months ago
• dina-lab3D / CombFold
  ☆86Updated last year
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆84Updated 4 months ago
• DunbrackLab / IPSAE
  Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3
  ☆99Updated 6 months ago
• bunzela / AIzymes
  ☆57Updated 2 months ago
• samuelmurail / af_analysis
  Analysis of alphafold and colabfold results
  ☆31Updated last week
• RP3Net / RP3Net
  ☆11Updated 4 months ago
• AbSciBio / igdesign
  ☆46Updated 8 months ago
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆69Updated last year
• regeneron-mpds / propermab
  ☆35Updated 6 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆43Updated last month
• WillHua127 / GENzyme
  Official repository of GENzyme
  ☆53Updated 10 months ago