Tools for the analysis of heterogeneous tissues
☆14Aug 24, 2022Updated 3 years ago
Alternatives and similar repositories for TOAST
Users that are interested in TOAST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10Mar 7, 2023Updated 3 years ago
- Repository for "Effective methods for bulk RNA-seq deconvolution using scRNA-seq and snRNA-seq derived transcriptomes"☆17Jul 9, 2023Updated 2 years ago
- Multi-Enrichment Analysis of Gene Set Enrichment Analysis Results☆26Feb 25, 2026Updated last month
- Highly informative TCR representation model☆15Nov 26, 2025Updated 4 months ago
- ☆10May 31, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆22Dec 19, 2025Updated 3 months ago
- GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools☆39Updated this week
- Equivariant layers for RC-complement symmetry in DNA sequence data☆12Feb 24, 2022Updated 4 years ago
- ☆12Jun 11, 2023Updated 2 years ago
- Cross-platform data for sequencing-based spatial transcriptomics benchmarking☆13Oct 26, 2023Updated 2 years ago
- A sandbox for benchmarking detection of out-of-reference cells in single-cell genomics data☆14Oct 21, 2024Updated last year
- Software for Nanopore Analysis☆10Mar 14, 2018Updated 8 years ago
- Read nanopore sequence reads in real-time☆14Feb 9, 2017Updated 9 years ago
- ☆13Jun 6, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆15Feb 28, 2025Updated last year
- ☆10Dec 4, 2019Updated 6 years ago
- Probabilistic factor models for spatially correlated data. Includes nonnegative and real-valued versions.☆18Dec 5, 2024Updated last year
- omics data analysis using clusterProfiler ;)☆15Jun 6, 2024Updated last year
- Important papers relating to the biology of cell free DNA☆19Sep 21, 2018Updated 7 years ago
- Tensorflow implementation for the Class-wise Selective Rationalization☆14Feb 15, 2023Updated 3 years ago
- ☆13Sep 29, 2023Updated 2 years ago
- ☆13Jan 29, 2021Updated 5 years ago
- SuperCell for Cytometry data☆13Oct 14, 2025Updated 5 months ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆29Sep 4, 2023Updated 2 years ago
- Molecular atlas of the human brain vasculature accross development, adulthood and disease at the single-cell level☆14Jul 10, 2024Updated last year
- TRUST4 manuscript evaluation☆17Jul 8, 2022Updated 3 years ago
- Identify major cellular signals in bulk transcriptomes☆11Jun 1, 2022Updated 3 years ago
- ☆31Apr 12, 2023Updated 2 years ago
- R package: ConDecon is a clustering-independent deconvolution method for estimating cell abundances in bulk tissues using single-cell RNA…☆13Oct 17, 2024Updated last year
- ☆11Jul 18, 2025Updated 8 months ago
- K-RET: Knowledgeable Biomedical Relation Extraction System☆10Feb 22, 2025Updated last year
- A computational framework for bulk RNA-seq deconvolution☆10Dec 3, 2024Updated last year
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆17Mar 18, 2025Updated last year
- Automatic selection of number of principal components☆17Jun 27, 2022Updated 3 years ago
- Tutorials for learning scverse☆19Mar 16, 2026Updated last week
- A collection of resources to filter 'bad' probes from the Illumina 450k and EPIC methylation arrays☆29Dec 5, 2023Updated 2 years ago
- Snakemake pipeline for benchmarking cell-type deconvolution methods and deconvolving real bulk RNA-seq data with the use of scRNA-seq dat…☆15Apr 28, 2025Updated 10 months ago
- A package for MR Practical Sessions☆20Apr 15, 2020Updated 5 years ago
- A library for the deconvolution of bulk cell samples using single-cell RNA expression data.☆23Nov 3, 2021Updated 4 years ago