scverse / scverse-tutorialsLinks
Tutorials for learning scverse
☆18Updated this week
Alternatives and similar repositories for scverse-tutorials
Users that are interested in scverse-tutorials are comparing it to the libraries listed below
Sorting:
- ☆27Updated 2 months ago
- Multiview Intercellular SpaTial modeling framework☆71Updated 5 months ago
- Pan-Cancer Single Cell Classifier☆81Updated last year
- ☆43Updated 3 weeks ago
- scAR (single-cell Ambient Remover) is a deep learning model for removal of the ambient signals in droplet-based single cell omics☆56Updated last year
- An R package performing object conversion from ArchRProject (ArchR) to Signac SeuratObject (Signac)☆37Updated last year
- Multi-modal single cell analysis pipelines☆61Updated last month
- Python library for plotting Cellphonedb results. Ported from ktplots R package.☆56Updated last week
- Gene regulatory network containing signed transcription factor-target gene interactions☆91Updated 6 months ago
- .h5mu files interface for Seurat☆32Updated 2 years ago
- R package for pathway analysis in scRNA-seq data☆76Updated last year
- Cell-type Relationship Analysis Workflow Done Across Distances☆37Updated last week
- Capybara: A computational tool to measure cell identity and fate transitions☆60Updated 3 years ago
- Coarse-graining of large single-cell RNA-seq data into metacells☆90Updated 4 months ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Updated 2 weeks ago
- Unified access to several second-generation deconvolution methods☆88Updated 3 weeks ago
- RNA-velocity informed embeddings for visualizing cellular trajectories☆44Updated 3 years ago
- A modular tool for proportion analysis in single-cell sequencing data☆23Updated 2 months ago
- Single-cell Lung Cancer Atlas with 1.2M cells☆80Updated 10 months ago
- ☆47Updated last month
- Multimodal weakly supervised learning to identify disease-specific changes in single-cell atlases☆35Updated 2 months ago
- ☆95Updated 2 months ago
- Toolkit for metacell analysis☆23Updated last year
- A Python implementation of the LEMUR algorithm for analyzing multi-condition single-cell RNA-seq data.☆28Updated 10 months ago
- Context specific and dynamic gene regulatory network reconstruction and analysis☆122Updated this week
- Visualizing SingleCell data Using GGplot2☆35Updated last year
- ☆45Updated last week
- AnnData interoperability in R☆130Updated last week
- CellANOVA: Cell State Space Analysis of Variance for signal recovery in single cell batch integration☆51Updated last year
- Finding gene expression states in scRNA-seq data☆51Updated last year