canzarlab / McSplicerLinks
☆11Updated 3 years ago
Alternatives and similar repositories for McSplicer
Users that are interested in McSplicer are comparing it to the libraries listed below
Sorting:
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆17Updated 2 weeks ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Benchmarking long-read RNA-seq analysis tools☆27Updated 5 months ago
- LncADeep is an ab initio lncRNA identification and functional annotation tool based on deep learning☆27Updated 7 years ago
- Comprehensive and scalable differential splicing analyses☆17Updated 4 months ago
- 🧪 Optimized protocol for m6A-SAC-seq☆11Updated last month
- Code for reproducing the Sei manuscript results☆17Updated 3 years ago
- Single-cell Hi-C data analysis toolbox☆27Updated 3 years ago
- ☆23Updated 4 years ago
- General Use Scripts and Helper functions☆16Updated 7 years ago
- A statistical tool to detect differential alternative splicing events using single-cell RNA-seq☆22Updated 2 years ago
- ☆35Updated 2 years ago
- ☆11Updated 4 years ago
- An R package to process and analyze transcriptomic data☆18Updated last month
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- Repository for reproducing results for lr-kallisto☆9Updated 3 months ago
- simplified cellranger for long-read data☆19Updated 3 months ago
- polyApipe☆18Updated 6 months ago
- A script to make downloading of SRA/GEO data easier☆31Updated last year
- ☆17Updated last year
- Pathway Enrichment-Guided Activity Study of Alternative Splicing (PEGASAS)☆19Updated 3 years ago
- Diverse sampling for single-cell datasets☆16Updated 5 years ago
- ☆39Updated last month
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- splicing and feature maps for RBPs☆25Updated 3 years ago
- PECA is a software for inferring context specific gene regulatory network from paired gene expression and chromatin accessibility data☆44Updated last year
- Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning☆17Updated 4 years ago
- Motif Scan and Enrichment Analysis (MoSEA)☆16Updated 4 years ago
- A flexible framework to annotate and prioritize cancer somatic mutations.☆8Updated 8 years ago
- ☆30Updated 8 months ago