mritchielab / GlimmaV2Links
interactive plots for differential expression analysis
☆32Updated 2 months ago
Alternatives and similar repositories for GlimmaV2
Users that are interested in GlimmaV2 are comparing it to the libraries listed below
Sorting:
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- ☆16Updated this week
- Sashimi plots for RNA-seq data using detected transcripts☆28Updated 2 months ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆16Updated 3 years ago
- Differential ATAC-seq toolkit☆27Updated last year
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 10 months ago
- Isoform-level functional RNA-Seq analysis 🧬☆25Updated last week
- ☆23Updated 4 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- 📊 An R package of RNA-seq workflow☆16Updated 3 years ago
- A small R package to make sequencing read coverage plots in R.☆38Updated 2 years ago
- Accurate estimation and robust modelling of translation dynamics at codon resolution☆20Updated 7 years ago
- a set of NGS pipelines☆24Updated last week
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated 2 weeks ago
- ☆9Updated 5 years ago
- A template repository for Snakemake pipepline(s) and a python command-line toolkit.☆28Updated 3 weeks ago
- Chromatin ACcessibility and Transcriptomics Unifying Software☆16Updated 7 months ago
- Chromatin segmentation in R☆19Updated 7 years ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 3 months ago
- Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics☆35Updated 2 weeks ago
- Repository for the Anczukow-Lab splicing pipeline☆15Updated 2 months ago
- A command line tool to compute mapping statistics from a BAM file☆24Updated 3 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆35Updated 11 months ago
- Merge fastq files split over lanes☆20Updated 7 years ago
- DriverPower☆26Updated 4 months ago
- DRAGEN Tumor/Normal workflow post-processing☆22Updated last year
- ☆28Updated 5 months ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year