mritchielab / GlimmaV2
interactive plots for differential expression analysis
☆32Updated last month
Alternatives and similar repositories for GlimmaV2
Users that are interested in GlimmaV2 are comparing it to the libraries listed below
Sorting:
- Isoform-level functional RNA-Seq analysis 🧬☆25Updated 5 months ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 2 years ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- ☆9Updated 5 years ago
- A small R package to make sequencing read coverage plots in R.☆38Updated 2 years ago
- Sashimi plots for RNA-seq data using detected transcripts☆28Updated last month
- ☆23Updated 3 years ago
- ☆28Updated 5 months ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 2 years ago
- BANDITS: Bayesian ANalysis of DIfferenTial Splicing☆17Updated last year
- A template repository for Snakemake pipepline(s) and a python command-line toolkit.☆28Updated this week
- Chromatin ACcessibility and Transcriptomics Unifying Software☆16Updated 6 months ago
- a set of NGS pipelines☆24Updated last week
- Merge fastq files split over lanes☆20Updated 7 years ago
- A command line tool to compute mapping statistics from a BAM file☆24Updated 3 years ago
- DRAGEN Tumor/Normal workflow post-processing☆22Updated last year
- Filter and prioritize fusion calls☆20Updated 7 months ago
- ☆22Updated 4 months ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆29Updated 9 months ago
- Isoform co-usage networks from single-cell RNA-seq data☆16Updated last year
- Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.☆18Updated 2 months ago
- TIMEOR: Trajectory Inference and Mechanism Exploration with Omics Data in R☆16Updated 3 years ago
- Make rapid visualizations of RNA-seq data in R☆19Updated 5 years ago
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last year
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated last week
- R package wrapping bedtools☆40Updated last month
- 📊 An R package of RNA-seq workflow☆16Updated 3 years ago
- ORF Quantification pipeline for Alternative Splicing☆16Updated 4 years ago
- ☆21Updated 11 months ago
- Differential ATAC-seq toolkit☆27Updated last year