mritchielab / GlimmaV2Links
interactive plots for differential expression analysis
☆34Updated 4 months ago
Alternatives and similar repositories for GlimmaV2
Users that are interested in GlimmaV2 are comparing it to the libraries listed below
Sorting:
- Interactive R package to quantify, analyse and visualise alternative splicing☆37Updated this week
- Create a cromphensive report of DEG list coming from any analysis of RNAseq data☆26Updated last month
- Isoform-level functional RNA-Seq analysis 🧬☆34Updated this week
- Differential expression and allelic analysis, nonparametric statistics☆30Updated 10 months ago
- deepStats: a stastitical toolbox for deeptools and genomic signals☆35Updated 4 years ago
- Relative Abundance of Transcripts: An R package for the detection of Differential Transcript isoform Usage.☆34Updated 3 years ago
- Slinker offers a succinct and complementary method to visualise RNA-Seq data through superTranscripts.☆19Updated 3 years ago
- Pairtree is a method for reconstructing cancer evolutionary history in individual patients, and analyzing intratumor genetic heterogeneit…☆40Updated last year
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- Differential gene expression analysis and pathway analysis of RNAseq data☆32Updated 4 months ago
- A p-value-free method for controlling false discovery rates in high-throughput biological data with two conditions☆39Updated 3 years ago
- Clone of the Bioconductor repository for the RUVSeq package, see https://bioconductor.org/packages/devel/bioc/html/RUVSeq.html for the of…☆14Updated 2 years ago
- Flexible and efficient parsing, interpreting and editing of sequencing reads☆44Updated 3 weeks ago
- Differential ATAC-seq toolkit☆27Updated last year
- Comprehensive Human Expressed SequenceS☆18Updated 4 months ago
- Sashimi plots for RNA-seq data using detected transcripts☆29Updated 7 months ago
- Sigflow: Streamline Analysis Workflows for Mutational Signatures, https://github.com/ShixiangWang/sigflow/pkgs/container/sigflow☆29Updated last year
- Snakemake pipeline for running MAJIQ☆23Updated last year
- iread☆25Updated 4 years ago
- A small R package to make sequencing read coverage plots in R.☆39Updated last week
- Calculate and plot distributions of genomic ranges☆26Updated 6 months ago
- An R interface to the MEME Suite☆53Updated 5 months ago
- DRAGEN Tumor/Normal workflow post-processing☆23Updated 2 years ago
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆16Updated 4 months ago
- Transcript quantification import with automatic metadata detection☆67Updated last month
- ☆29Updated last year
- Merge fastq files split over lanes☆20Updated 7 years ago
- Millefy: Genome browser-like visualization of single-cell RNA-seq dataset☆29Updated 5 years ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆36Updated last year
- The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating fro…☆36Updated last year