R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis
☆32Jan 28, 2026Updated last month
Alternatives and similar repositories for ReactomeGSA
Users that are interested in ReactomeGSA are comparing it to the libraries listed below
Sorting:
- Statistical power studies for multi-omics experiments.☆32Jan 18, 2025Updated last year
- An R package for extracting mutational signatures from vcf files☆11Feb 13, 2025Updated last year
- qpx (Quantitative Proteomics eXchange) format (aka quantms.io) a format to capture a full proteomics experiment☆15Updated this week
- Community effort to evaluate computational methods for the detection and quantification of poly(A) sites and estimating their differentia…☆14Jan 11, 2024Updated 2 years ago
- XEnograft Visualization & Analysis☆11Oct 18, 2025Updated 4 months ago
- ☆11Nov 21, 2025Updated 3 months ago
- ☆12Jul 22, 2025Updated 7 months ago
- The official repository for the deepSNV bioconductor packages. Branch master tracks the official Bioconductor development branch.☆17Jun 1, 2022Updated 3 years ago
- Execute command line tool from R☆20Sep 29, 2025Updated 5 months ago
- ☆18Jun 13, 2024Updated last year
- Absolute quantification package based on quantms.io☆16Sep 25, 2025Updated 5 months ago
- Data Integration tool utilizing network information for predictive analyses☆16May 15, 2025Updated 9 months ago
- An R package for multi-dimensional pathway enrichment analysis☆17Jan 8, 2026Updated last month
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆66Feb 10, 2026Updated 2 weeks ago
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆20Oct 10, 2024Updated last year
- Comprehensive Human Expressed SequenceS☆19Jul 13, 2025Updated 7 months ago
- Multi-omics disease sub-type specific drug repositioning aided with expression signatures from ConnectivityMap☆18Mar 7, 2020Updated 5 years ago
- An Interactive Consensus Clustering framework for Cross-platform data analysis☆14Jan 28, 2022Updated 4 years ago
- Network construction Algorithm☆22Sep 5, 2024Updated last year
- An r package that works as a wrapper to homologene☆49Nov 2, 2023Updated 2 years ago
- TCGA Workflow: Analyze cancer genomics and epigenomics data using Bioconductor packages☆50Jun 30, 2023Updated 2 years ago
- The "copynumber" R package with support for hg38☆20Apr 10, 2023Updated 2 years ago
- Multi-omics data normalisation, model fitting and visualisation.☆27Apr 6, 2023Updated 2 years ago
- Multi-omics studies are available here☆52Jul 3, 2022Updated 3 years ago
- Clonal and subclonal Copy Number Alteration quality check integrating somatic mutation☆25Jan 28, 2026Updated last month
- Smooth quantile normalization (qsmooth) is a generalization of quantile normalization, which is an average of the two types of assumption…☆52Nov 5, 2022Updated 3 years ago
- CAusal Reasoning for Network Identification with integer VALue programming in R☆61Dec 6, 2023Updated 2 years ago
- Seamless navigation through combined results of set-based and network-based enrichment analysis☆22Sep 14, 2025Updated 5 months ago
- RNAseq analysis pipeline☆27Feb 12, 2026Updated 2 weeks ago
- ☆20Oct 27, 2023Updated 2 years ago
- Gene set scoring for single-cell data☆183Feb 11, 2026Updated 2 weeks ago
- Spatial direct messaging detected by bivariate Moran☆32Jul 16, 2025Updated 7 months ago
- software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis☆30Jan 24, 2022Updated 4 years ago
- Interactive and integrated analysis of multiplexed tissue microarrays☆14Updated this week
- interactive plots for differential expression analysis☆34Jun 19, 2025Updated 8 months ago
- Bead-based single-cell atac processing☆33Nov 13, 2021Updated 4 years ago
- Transcript quantification import with automatic metadata detection☆68Feb 3, 2026Updated 3 weeks ago
- User-friendly software for viewing and processing Sanger DNA sequencing trace files.☆32Mar 27, 2018Updated 7 years ago
- ☆34Jun 7, 2019Updated 6 years ago