Documentation for the cellxgene product
☆17Sep 13, 2022Updated 3 years ago
Alternatives and similar repositories for cellxgene-documentation
Users that are interested in cellxgene-documentation are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Generate a spatial catalogue from multiplexed imaging data☆19Jun 12, 2025Updated 11 months ago
- cnv-seq with custom bugfix☆10Mar 23, 2013Updated 13 years ago
- ☆15Nov 9, 2018Updated 7 years ago
- A tool to annotate human VCF files with PolyPhen2 effect measures☆10Dec 26, 2022Updated 3 years ago
- An interactive explorer for single-cell transcriptomics data☆770May 22, 2026Updated last week
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Resources and documentation for UK Biobank to OMOP CDM v5.3.1 conversion☆10Oct 20, 2020Updated 5 years ago
- pipeline for dog WGS alignment☆15Jun 27, 2023Updated 2 years ago
- Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue image…☆58May 8, 2024Updated 2 years ago
- Single cell type annotation guided by cell atlases, with freedom to be queer☆25Jul 25, 2022Updated 3 years ago
- A quick recap of widely used differential analyses methods in R for RNA-seq experiments☆16Dec 7, 2024Updated last year
- Tutorials for multimodal omics data analysis☆20Feb 28, 2025Updated last year
- Convert between AnnData and SingleCellExperiment☆150Updated this week
- Tool to identify concept in the OMOP Genomic vocabulary from VCF and other files as well as HGVS notations☆15May 6, 2024Updated 2 years ago
- Demo App: https://rinpharma.shinyapps.io/clinsight/ Development version website: https://openpharma.github.io/clinsight/dev☆13Mar 3, 2026Updated 2 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A pipeline to rapidly detect exogenous DNA integration sites using DNA or RNA paired-end sequencing data☆12Apr 25, 2023Updated 3 years ago
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Sep 18, 2025Updated 8 months ago
- R script for calculating the SpatialScore as described in our manuscript: "Immune cell topography predicts response to PD-1 blockade in c…☆17Sep 26, 2021Updated 4 years ago
- Multi-agent LLM driven cell type annotation for single-cell RNA-Seq data☆37Apr 30, 2026Updated 3 weeks ago
- ☆14Jun 21, 2021Updated 4 years ago
- Combined de novo transcriptome assembly - multiple assemblers - multiple parameters☆18Dec 1, 2021Updated 4 years ago
- A variational autoencoder-based approach for copy number variation inference using single-cell transcriptomics☆11Mar 11, 2024Updated 2 years ago
- Converts snpeff annotations into MAF☆11Aug 23, 2024Updated last year
- This package helps wrangle the clinical data in IBD Plexus. IBD Plexus is a data exchange platform designed to accelerate research toward…☆20Apr 17, 2026Updated last month
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- sharing interactive single cell gene expression visualizations from Seurat☆13May 18, 2023Updated 3 years ago
- The scripts used for analyzing JAX mouse dataset☆26Oct 24, 2024Updated last year
- ☆13Apr 4, 2023Updated 3 years ago
- ☆17Oct 4, 2025Updated 7 months ago
- Process images using SimpleITK in napari☆23May 1, 2025Updated last year
- Incremental kernel PCA☆31Mar 13, 2021Updated 5 years ago
- Build predicted cell-cell interaction networks from single-cell data.☆10Jan 31, 2023Updated 3 years ago
- Generate rust command line executables from gRPC protobuf services.☆11Aug 27, 2022Updated 3 years ago
- Porting of Protein Activity and Pathway Inference to single cell and Python.☆14May 4, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Template package for Reactive data app using R, plumber, and react☆15Oct 28, 2018Updated 7 years ago
- ☆18Apr 5, 2024Updated 2 years ago
- Accurate, deep, fast, and fully-automated scRNA-seq cell-type annotation☆15Jan 21, 2025Updated last year
- Reproducing all analyses and figures for the ASAP-seq paper☆29Jun 11, 2021Updated 4 years ago
- Rounded Bar Plots☆19May 1, 2026Updated 3 weeks ago
- WhatsCloud is an android app which allows you to analyze your WhatsApp chat history on the fly with only one click☆12Jul 29, 2019Updated 6 years ago
- Holds the code and data to reproduce the analyses of Danaher & Kim et a;, "Advances in mixed cell deconvolution enable quantification of …☆12Dec 8, 2021Updated 4 years ago