campaslab / napari-stressLinks
Interactive surface analysis in napari for bio-mechanical stress measurement
☆18Updated last week
Alternatives and similar repositories for napari-stress
Users that are interested in napari-stress are comparing it to the libraries listed below
Sorting:
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 9 months ago
- Guides and code for 3D nuclear instance segmentation☆22Updated 2 months ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆18Updated 4 months ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆45Updated 2 weeks ago
- Visualizing feature measurements on label images in napari☆10Updated last year
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆17Updated last month
- Whole slide image registration through wsireg in napari.☆12Updated 2 years ago
- ☆50Updated this week
- A stable diffusion demo for napari☆11Updated last year
- Command-line client for Fractal☆46Updated this week
- A napari plugin for clustering objects according to their properties.☆87Updated this week
- ☆32Updated last year
- MethodsJ2☆14Updated 3 years ago
- MultiModal Big Image Data Sharing and Exploration☆17Updated 2 years ago
- QuPath extension for Cellsparse☆19Updated 4 months ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 4 years ago
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 11 months ago
- ☆39Updated this week
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆33Updated last month
- Accelerated Pixel and Object Classifiers (APOC)☆56Updated 2 months ago
- EASI-FISH analysis pipeline for spatial transcriptomics☆35Updated 10 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆18Updated 2 weeks ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- A platform for compiling, analyzing, and exploring tracking data☆47Updated last month
- Track and lineage visualization with btrack and Napari☆45Updated 10 months ago
- A tutorial of classical shape analysis methods☆11Updated last year
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- ☆51Updated 4 months ago
- ilastik plugin for napari☆14Updated last week