idse / imsane
☆11Updated 3 years ago
Alternatives and similar repositories for imsane:
Users that are interested in imsane are comparing it to the libraries listed below
- Interactive, particle-based physics, chemistry and biology modeling and simulation environment☆22Updated 2 months ago
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆29Updated last week
- Julia package for the Napari multi-dimensional image viewer☆10Updated 2 years ago
- Software for Quantifying Mitochondrial Content in Live Cells☆26Updated 9 months ago
- A napari plugin for filament analysis☆9Updated last year
- Interacting Active Surfaces☆8Updated 2 years ago
- Simulation platform of animal embryogenesis☆20Updated 2 years ago
- Create 3D/4D animations using a natural language-based syntax☆59Updated 2 years ago
- ☆20Updated 2 months ago
- ☆20Updated last year
- Parts list and build instructions for our high-numerical-aperture lightsheet. Read the publication here: https://andrewgyork.github.io/hi…☆22Updated 9 months ago
- ☆18Updated last year
- Lectures for a napari training course☆50Updated last year
- CPM implementation in pure JavaScript☆32Updated 2 months ago
- LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.☆18Updated last year
- Accurate segmentation of bacterial microscope images using deep learning synthetically generated image data.☆19Updated 8 months ago
- Spheroid models of morphogenesis for the GPU.☆41Updated last year
- A platform for compiling, analyzing, and exploring tracking data☆43Updated last month
- An R package for the analysis and interpretation of cell migration tracks.☆13Updated 7 months ago
- Interactive surface analysis in napari for bio-mechanical stress measurement☆18Updated this week
- ☆19Updated 3 years ago
- A napari plugin for zarr backed OME-NGFF images☆33Updated 2 weeks ago
- Online documentation and reference for CLIJ☆28Updated 3 years ago
- Process images using SimpleITK in napari☆20Updated 6 months ago
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆35Updated 7 months ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆19Updated this week
- ☆48Updated 6 months ago
- 4D reconstruction of developmental trajectories using spherical harmonics☆21Updated 3 weeks ago
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆52Updated 5 months ago
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆16Updated last month