BiAPoL / Image-data-science-with-Python-and-Napari-EPFL2022
☆14Updated last year
Related projects ⓘ
Alternatives and complementary repositories for Image-data-science-with-Python-and-Napari-EPFL2022
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆12Updated last week
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆15Updated 2 years ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated last month
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆23Updated last week
- ☆15Updated 2 years ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 3 months ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated last year
- A minimal dependency napari plugin giving access to scikit-image functions☆17Updated 2 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆37Updated last month
- Denoising via adaptive binning.☆12Updated 4 months ago
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated last month
- A napari plugin to view and edit metadata☆10Updated last year
- Segment images by pixel classification based on pre-trained convolutional layer feature extraction☆23Updated last month
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Updated last year
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆25Updated 5 months ago
- ☆10Updated 3 months ago
- Z-stack Depth Colorcode ImageJ FIJI plugin☆22Updated 3 years ago
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Updated last year
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆16Updated 7 years ago
- ☆13Updated 4 years ago
- A collection of demonstration materials for MorphoLibJ.☆11Updated last year
- A Board Game to teach co-localization analysis☆12Updated 3 weeks ago
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆12Updated 2 years ago
- ☆43Updated last month
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 3 weeks ago
- Annotate microscopy images for CNN classifier☆10Updated 2 years ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆47Updated last month
- Process and analyze surfaces using vedo in napari.☆23Updated 6 months ago
- Course on Deep Learning for imaging using PyTorch☆13Updated 2 years ago
- ☆17Updated 2 years ago