BiAPoL / Image-data-science-with-Python-and-Napari-EPFL2022Links
☆15Updated last year
Alternatives and similar repositories for Image-data-science-with-Python-and-Napari-EPFL2022
Users that are interested in Image-data-science-with-Python-and-Napari-EPFL2022 are comparing it to the libraries listed below
Sorting:
- ☆51Updated 2 months ago
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆15Updated 2 years ago
- A collection of demonstration materials for MorphoLibJ.☆12Updated 2 years ago
- A place to collect information used in lectures, demos, workshops, etc.☆17Updated 9 months ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆15Updated 2 months ago
- A napari plugin to analysis point spread functions.☆13Updated 3 months ago
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated 2 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated last week
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆27Updated 2 months ago
- ☆15Updated 2 years ago
- Imagej toolset to ease hyperstacks visualization and handling☆22Updated 9 months ago
- some useful function to get Label from ROIs and vice versa , and more!☆12Updated 2 years ago
- Materials for the "ImageJ/Fiji Level 2: Automation and batch processing using macros" course taught at the Wolfson Bioimaging Facility, U…☆13Updated 3 years ago
- ☆11Updated 3 weeks ago
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Updated 2 years ago
- Generate markdown notebooks from ImageJ Macro☆25Updated 4 years ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Updated last year
- "Defragmentation TS2: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: work…☆10Updated 2 years ago
- ☆11Updated 3 months ago
- Annotate microscopy images for CNN classifier☆11Updated 3 years ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆20Updated 7 months ago
- ☆21Updated last year
- napari plugin for trackastra☆15Updated 8 months ago
- Denoising via adaptive binning.☆12Updated last year
- Course on Deep Learning for imaging using PyTorch☆13Updated 3 years ago
- This repository contains the materials for the University of Oxford DTC ONBI Image Analysis course☆18Updated 7 years ago
- A Fiji/ImageJ plugin to generate ROIs from label images, allowing ROI erosion and quantification☆23Updated 3 years ago
- An R package to detect collective spatio-temporal phenomena☆13Updated 7 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆40Updated 2 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆18Updated last month