A tutorial of classical shape analysis methods
☆11Nov 25, 2023Updated 2 years ago
Alternatives and similar repositories for shapeanalysis101
Users that are interested in shapeanalysis101 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆14May 17, 2024Updated 2 years ago
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Jul 1, 2026Updated last month
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated 2 weeks ago
- Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data☆21May 11, 2026Updated 3 months ago
- Interactive surface analysis in napari for bio-mechanical stress measurement☆18Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- A minimal Python package for reading, writing and validating OME-Zarr (meta)data☆39Aug 7, 2026Updated last week
- A pilot experiment to dissminate information about Janelia's biomaging data formats.☆12Jan 30, 2025Updated last year
- A minimal dependency napari plugin giving access to scikit-image functions☆23Jul 6, 2026Updated last month
- Reference implementation of the Graph Exchange File Format☆42Updated this week
- Pydantic models for OME-NGFF☆24Sep 14, 2025Updated 11 months ago
- QuickFigures is a toolset for creating scientific figures see publication for details☆38Feb 1, 2026Updated 6 months ago
- ☆19Nov 12, 2025Updated 9 months ago
- GPU-accelerated Image Processing library for Python☆64Updated this week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆22Mar 12, 2026Updated 5 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- GPU-based 3D non-rigid volumetric registration☆49Aug 26, 2025Updated 11 months ago
- The RPC library used in ImJoy.☆25Jul 23, 2024Updated 2 years ago
- Dockerfile to build a working CellProfiler (http://cellprofiler.org/) image☆11Jun 2, 2022Updated 4 years ago
- Modern Bio-Formats wrapper with clean lazy Python API☆23Jun 25, 2026Updated last month
- Distributed segmentation for bio-image-analysis☆42Jun 5, 2026Updated 2 months ago
- An introduction to OME-Zarr for big bioimaging data☆27Updated this week
- Easy Volumetric Segmentation with Deep Learning☆30Mar 30, 2026Updated 4 months ago
- Streaming directly to Zarr on the file system or S3☆30Updated this week
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Jun 5, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- 4D reconstruction of developmental trajectories using spherical harmonics☆23Mar 25, 2025Updated last year
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆31May 28, 2026Updated 2 months ago
- A Versatile and Open Source One- and Two-Photon Light-Sheet Microscope Design☆15Jul 27, 2023Updated 3 years ago
- An R package to detect collective spatio-temporal phenomena☆13Sep 25, 2025Updated 10 months ago
- "Defragmentation: bringing BioImage Analysts to the cloud!” training school for the new generation of bioimage analysts. Topics: workflow…☆15Apr 30, 2023Updated 3 years ago
- SCIFIO ImageIO plugin for ITK☆16Apr 23, 2026Updated 3 months ago
- R package for visualization of highly multiplexed imaging data☆36Jun 9, 2026Updated 2 months ago
- Resources for teaching/preparing to teach bioimage analysis☆63Aug 6, 2026Updated last week
- A collection of demonstration materials for MorphoLibJ.☆12Jan 12, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- An optimized OpenCL implementation of Gradient Vector Flow (GVF) that runs on GPUs and CPUs for both 2D and 3D. For more details about th…☆30Jan 15, 2017Updated 9 years ago
- Webin XML and JSON API.☆14Jul 13, 2026Updated last month
- Monte-Carlo State Space Models☆19Jul 1, 2024Updated 2 years ago
- Creating figures and animations for multi-channel images with a focus on microscopy.☆82Dec 16, 2024Updated last year
- N-dimensional arrays, with Zarr and HDF5 integrations☆19Feb 26, 2019Updated 7 years ago
- A napari plugin to view and edit layer metadata☆13Updated this week
- An ontology of imaging and related techniques and technologies, image processing and analysis, image data and formats, within bio- and ot…☆12May 4, 2026Updated 3 months ago