SuperElastix / elastix-napari
A napari plugin for itk-elastix
☆38Updated 9 months ago
Alternatives and similar repositories for elastix-napari:
Users that are interested in elastix-napari are comparing it to the libraries listed below
- INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration☆11Updated 3 years ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated last month
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 3 months ago
- Process and analyze surfaces using vedo in napari.☆23Updated 10 months ago
- ☆41Updated last week
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆18Updated 4 years ago
- Process images using SimpleITK in napari☆20Updated 5 months ago
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆33Updated 2 years ago
- A template repo used to make new napari plugins☆16Updated last week
- Python module for registering and fusing multi-view microscopy data☆23Updated 3 weeks ago
- Tools for distributed alignment of massive images☆81Updated last month
- ☆24Updated 3 months ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- Script that registers Histology slices to volumetric image data☆11Updated last year
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆16Updated this week
- Speed up coding/extending image analysis in Python.☆32Updated last week
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆26Updated 4 months ago
- ☆20Updated last year
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆63Updated last month
- A napari plugin for clustering objects according to their properties.☆82Updated last week
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated 5 months ago
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆54Updated last week
- Easily read and write ome-tiff images in python☆26Updated 10 months ago
- Optimize image processing workflows in napari☆17Updated 2 years ago
- A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.☆32Updated last month
- MorphoFeatures code and data☆20Updated last year
- Create movies from series of key-frames in napari.☆37Updated 3 years ago
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated 5 months ago
- Online documentation and reference for CLIJ☆28Updated 3 years ago
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆23Updated 4 months ago