SuperElastix / elastix-napari
A napari plugin for itk-elastix
☆38Updated 8 months ago
Alternatives and similar repositories for elastix-napari:
Users that are interested in elastix-napari are comparing it to the libraries listed below
- Tools for distributed alignment of massive images☆80Updated 2 weeks ago
- Open-source, GPU accelerated code for deskewing and deconvolving lattice light sheet data☆25Updated 4 years ago
- Python-based Human-In-the-LOop Workflow: PHILOW is an interactive deep learning-based platform for 3D datasets☆26Updated 2 weeks ago
- 3D Extension of the Cellpose Algorithm by Stringer et al., 2021.☆33Updated 2 years ago
- A deep-learning library for denoising images using Noise2Void and friends (CARE, PN2V, HDN etc.), with a focus on user-experience and doc…☆59Updated this week
- Process images using SimpleITK in napari☆20Updated 4 months ago
- Fast4DReg is a Fiji script for quick drift correction in time-lapse 3D-stacks. The script can be used to correct drift in all x-, y- and/…☆39Updated 2 months ago
- Create movies from series of key-frames in napari.☆37Updated 3 years ago
- StarDist plugin for napari☆37Updated 6 months ago
- ☆41Updated this week
- GPU-accelerated general purpose image processing and image analysis in napari☆35Updated 4 months ago
- Utils and convenience functions for large-scale bio-image analysis.☆52Updated 3 weeks ago
- Intensify3D is an image normalization tool for large scale fluorescent imaging. It corrects heterogeneities in the signal (defined by the…☆18Updated 3 years ago
- Easily read and write ome-tiff images in python☆26Updated 9 months ago
- Process and analyze surfaces using vedo in napari.☆24Updated 9 months ago
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆43Updated last year
- Python module for registering and fusing multi-view microscopy data☆23Updated last year
- Optimize image processing workflows in napari☆17Updated 2 years ago
- MorphoFeatures code and data☆20Updated last year
- ☆24Updated 2 months ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆61Updated last month
- A napari plugin for clustering objects according to their properties.☆82Updated 2 weeks ago
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆54Updated this week
- INSPIRE: Intensity and Spatial Information-Based Deformable Image Registration☆11Updated 3 years ago
- Script that registers Histology slices to volumetric image data☆11Updated last year
- Feature extraction for labeled objects in images using regionprops from scikit-image☆50Updated 4 months ago
- Napari Visualization tool for Trackmate > 6.0 and bTrackmate XML files for 2/3D + time tracks. Available via pip package napatrackmater.☆16Updated this week
- Accelerated Pixel and Object Classifiers (APOC)☆54Updated 2 weeks ago
- ☆20Updated last year
- A napari plugin for making animations☆83Updated 5 months ago