Most of us study and work at the Bio-image Analysis Technology Development group at the DFG Cluster of Excellence “Physics of Life” at the TU Dresden. We blog about image data science, knowledge exchange and research data management in the life sciences.
☆16Jun 27, 2025Updated last year
Alternatives and similar repositories for blog
Users that are interested in blog are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- FLIM-focused framework for multimodal single-cell imaging: extract features from FLIM and QPI data, then analyze any tabular dataset inte…☆19Oct 23, 2026Updated last week
- A napari plugin to view and edit layer metadata☆14Oct 21, 2026Updated last week
- Interactive surface analysis in napari for bio-mechanical stress measurement☆18Updated this week
- Efficient graph data structures and algorithms for fast slicing, visualization, and editing☆13Jul 1, 2026Updated 4 months ago
- This is the course material for the introductory course into Python basics for Data Scientists.☆12Apr 24, 2026Updated 6 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆18Nov 10, 2022Updated 3 years ago
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Jun 5, 2024Updated 2 years ago
- A short course exploring several fun and useful notebooks and Napari widgets for deep learning with SAM, Cellpose, Stardist and friends.☆19Dec 9, 2025Updated 10 months ago
- ☆13May 12, 2026Updated 5 months ago
- ☆11Jul 15, 2024Updated 2 years ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆47Dec 4, 2025Updated 10 months ago
- ☆53May 1, 2025Updated last year
- A stable diffusion demo for napari☆11Jun 7, 2026Updated 4 months ago
- Java Image Processing Pipeline (JIPipe) is a graphical batch processing language for the ImageJ ecosystem☆18Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Commands and Classes for interfacing between Imaris and Fiji☆13Sep 1, 2026Updated 2 months ago
- Process and analyze surfaces using vedo in napari.☆26May 13, 2024Updated 2 years ago
- Conversion between spatial transformations of various formats / parametrizations☆10May 15, 2026Updated 5 months ago
- ☆16Jan 22, 2026Updated 9 months ago
- An OMERO.web app for sharing data and prepare data for web download.☆12Sep 18, 2026Updated last month
- ☆15Updated this week
- A self-supervised denoising algorithm.☆31Oct 5, 2026Updated 3 weeks ago
- A 3D interactivity toolbox for napari☆38Jul 8, 2025Updated last year
- napari plugin to open CZI image files and their metadata☆17Oct 20, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Script that registers Histology slices to volumetric image data☆11Oct 4, 2023Updated 3 years ago
- StarDist plugin for napari☆42Aug 24, 2024Updated 2 years ago
- ilastik plugin for napari☆15Mar 2, 2026Updated 7 months ago
- Loading and saving of image data.☆11Feb 9, 2024Updated 2 years ago
- ☆12Feb 23, 2026Updated 8 months ago
- A collection of Python Jupyter Notebooks with Generative Artificial Intelligence related contents☆17Oct 23, 2026Updated last week
- Gamified image segmentation quality estimation☆20May 1, 2025Updated last year
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆19Jul 26, 2026Updated 3 months ago
- GPU-accelerated Image Processing library for C++☆16Updated this week
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 3 years ago
- This repository provides a collection of tools to simplify reading CZI (Carl Zeiss Image) pixel and metadata in Python.☆22Oct 13, 2026Updated 2 weeks ago
- napari plugin for trackastra☆19Jul 16, 2026Updated 3 months ago
- Python package for reading imaging mass cytometry (IMC) files☆20Updated this week
- ☆24Sep 13, 2025Updated last year
- ☆39Updated this week
- Adds support for Helix Core P4 in Godot 4.1☆10Oct 18, 2023Updated 3 years ago