haesleinhuepf / napari-process-points-and-surfacesView external linksLinks
Process and analyze surfaces using vedo in napari.
☆25May 13, 2024Updated last year
Alternatives and similar repositories for napari-process-points-and-surfaces
Users that are interested in napari-process-points-and-surfaces are comparing it to the libraries listed below
Sorting:
- This repository hosts notebooks, information and data for the Quantitative Bio-Image Analysis with Python Course 2022.☆16Nov 10, 2022Updated 3 years ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Jul 7, 2025Updated 7 months ago
- Speed up coding/extending image analysis in Python.☆37Jan 20, 2026Updated 3 weeks ago
- How to use Aligning Big Brains and Atlases with Python☆14May 3, 2023Updated 2 years ago
- ilastik plugin for napari☆14Dec 15, 2025Updated 2 months ago
- Generate multifunctional and macro recordable GUIs from Python classes☆45Nov 16, 2025Updated 3 months ago
- ☆22Aug 17, 2023Updated 2 years ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Nov 25, 2025Updated 2 months ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Jan 5, 2026Updated last month
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 3 years ago
- Gamified image segmentation quality estimation☆19May 1, 2025Updated 9 months ago
- Linking napari layers with Matplotlib plots☆43Feb 2, 2026Updated 2 weeks ago
- Accelerated Pixel and Object Classifiers (APOC)☆59Jul 18, 2025Updated 6 months ago
- dask empowered fast4dreg☆15Nov 25, 2024Updated last year
- Evaluating the quality of a cell segmentation method without reference.☆13Jul 26, 2025Updated 6 months ago
- ☆20May 1, 2025Updated 9 months ago
- Interactive surface analysis in napari for bio-mechanical stress measurement☆18Feb 9, 2026Updated last week
- ☆14Jan 25, 2024Updated 2 years ago
- 4D reconstruction of developmental trajectories using spherical harmonics☆23Mar 25, 2025Updated 10 months ago
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 7 months ago
- Segmentation method able to detect membrane/nuclei-labelled cells with low signal-to-noise ratio and dense packing in 2D and 3D. Availabl…☆34Oct 8, 2025Updated 4 months ago
- A fully scalable robust image feature extraction library.☆28Updated this week
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆25Nov 21, 2024Updated last year
- ☆36Mar 22, 2024Updated last year
- A Python toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆105Updated this week
- Dataset EXploration & Processing☆33May 11, 2023Updated 2 years ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30May 1, 2025Updated 9 months ago
- A plugin to read whole slide images within napari.☆21Nov 24, 2025Updated 2 months ago
- A napari plugin for clustering objects according to their properties.☆90Feb 9, 2026Updated last week
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆55Nov 13, 2025Updated 3 months ago
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆18Apr 8, 2025Updated 10 months ago
- Optimize image processing workflows in napari☆17May 1, 2025Updated 9 months ago
- ☆13Jan 22, 2026Updated 3 weeks ago
- A stable diffusion demo for napari☆11Dec 15, 2023Updated 2 years ago
- Image reading, metadata management, and image writing for Microscopy images in Python☆112Dec 22, 2025Updated last month
- Use ImageJ functionality from napari☆33Jan 2, 2026Updated last month
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆45May 1, 2025Updated 9 months ago
- Command-line client for Fractal☆48Updated this week
- Course on Deep Learning for imaging using PyTorch☆13Feb 2, 2022Updated 4 years ago