Process images using SimpleITK in napari
☆23May 1, 2025Updated last year
Alternatives and similar repositories for napari-simpleitk-image-processing
Users that are interested in napari-simpleitk-image-processing are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Interactive surface analysis in napari for bio-mechanical stress measurement☆18Updated this week
- ☆52May 1, 2025Updated last year
- PoL Bioimage Analysis Training School: GPU-Accelerated Image Analysis Track☆28Jun 5, 2024Updated 2 years ago
- A napari plugin for clustering objects according to their properties.☆91Updated this week
- Track and lineage visualization with btrack and Napari☆46Sep 29, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Resources for teaching/preparing to teach bioimage analysis☆65Oct 5, 2026Updated last week
- StarDist plugin for napari☆42Aug 24, 2024Updated 2 years ago
- ☆22Aug 17, 2023Updated 3 years ago
- ☆15Apr 1, 2026Updated 6 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆32May 1, 2025Updated last year
- General information, resources and dicussions for the BrainGlobe project.☆11Feb 21, 2025Updated last year
- A self-supervised denoising algorithm.☆31Oct 5, 2026Updated last week
- Blue Brain multi-modal registration and alignment toolbox☆12Feb 14, 2024Updated 2 years ago
- ☆24Jul 22, 2026Updated 2 months ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated 2 years ago
- Whole slide image registration through wsireg in napari.☆12Apr 21, 2023Updated 3 years ago
- Code for the image processing and analysis described our Nature Protocols paper.☆10Jun 26, 2015Updated 11 years ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆26Nov 25, 2025Updated 10 months ago
- MagellanMapper is a graphical interface for 3D bioimage annotation, atlas registration, and regional quantification☆23Mar 30, 2026Updated 6 months ago
- Napari plugin for vollseg☆14Jul 16, 2025Updated last year
- GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled object classification in napari.☆49May 1, 2025Updated last year
- The known BioVoxxel Toolbox functions now improved for 2D and 3D images☆21Feb 10, 2026Updated 8 months ago
- Segment images utilizing pre-trained neural networks as feature extractors☆55Jul 3, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A 3D interactivity toolbox for napari☆38Jul 8, 2025Updated last year
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 5 years ago
- ☆15Updated this week
- Benchmarking Large Language Models for Bio-Image Analysis Code Generation☆26Jun 3, 2026Updated 4 months ago
- Script that registers Histology slices to volumetric image data☆11Oct 4, 2023Updated 3 years ago
- A module with convenience functions for writing Python code that interacts with OMERO.☆47Dec 4, 2025Updated 10 months ago
- Create movies from series of key-frames in napari.☆38May 24, 2021Updated 5 years ago
- Python libraries for loading, running and packaging bioimage.io models☆40Sep 15, 2026Updated last month
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A python script editor plugin for napari☆11Jul 8, 2023Updated 3 years ago
- Detect morphological motifs, such as blebs, filopodia, and lamellipodia, from 3D images of surfaces, particularly images of cell surfaces…☆33Oct 1, 2026Updated 2 weeks ago
- Gamified image segmentation quality estimation☆20May 1, 2025Updated last year
- CUDA-accelerated 3D BioImage Computing (ICCV BIC 2025)☆31Oct 7, 2026Updated last week
- 3D segmention tool☆13Apr 6, 2023Updated 3 years ago
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆32Oct 13, 2023Updated 3 years ago
- GPU-based 3D non-rigid volumetric registration☆49Aug 26, 2025Updated last year