pymmcore-plus / napari-micromanagerLinks
GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets
☆71Updated 2 weeks ago
Alternatives and similar repositories for napari-micromanager
Users that are interested in napari-micromanager are comparing it to the libraries listed below
Sorting:
- Pure python/C++ micro-manager ecosystem☆43Updated 2 weeks ago
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆20Updated 2 weeks ago
- Python bindings for MMCore, Micro-Manager's device control layer☆35Updated 3 weeks ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆91Updated last week
- Place to discuss the future design of a universal microscope hardware interface☆15Updated 4 years ago
- A napari plugin for zarr backed OME-NGFF images☆40Updated last week
- ☆51Updated 6 months ago
- ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…☆81Updated 2 weeks ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆23Updated last year
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆70Updated 2 weeks ago
- navigate - open source light-sheet microscope controls☆38Updated last week
- ☆36Updated last year
- napari plugin for trackastra☆17Updated last month
- Creating figures and animations for multi-channel images with a focus on microscopy.☆78Updated 11 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆23Updated 2 months ago
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated 2 weeks ago
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆19Updated 3 weeks ago
- A napari plugin for making animations☆90Updated last month
- Nanoscopy library for Python (NanoPyx, the successor to NanoJ) - focused on light microscopy and super-resolution imaging☆88Updated last week
- Browse your OMERO database from within napari.☆39Updated 2 weeks ago
- A napari plugin to analysis point spread functions.☆13Updated 7 months ago
- native Python dataclasses for the OME data model☆64Updated 2 weeks ago
- Full-featured nd2 (Nikon NIS Elements) file reader for python. Outputs to numpy, dask, and xarray. Exhaustive metadata extraction☆71Updated 2 weeks ago
- Fluorescence Lifetime Ultimate Explorer (FLUTE) is a GUI for exploring and analyzing Fluorescence Lifetime Microscopy (FLIM) data☆28Updated 11 months ago
- Python control of micro-manager for customized data acquisition☆174Updated 2 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆30Updated 6 months ago
- Robust and unbiased estimation of the background distribution for fluorescence microscopy.☆12Updated last month
- User-affordable and versatile light-sheet microscopy system for cleared specimens☆25Updated 8 months ago
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated 2 weeks ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 7 months ago