pymmcore-plus / napari-micromanagerLinks
GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets
☆72Updated 3 weeks ago
Alternatives and similar repositories for napari-micromanager
Users that are interested in napari-micromanager are comparing it to the libraries listed below
Sorting:
- Pure python/C++ micro-manager ecosystem☆42Updated last week
- Python bindings for MMCore, Micro-Manager's device control layer☆35Updated this week
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆20Updated 2 weeks ago
- A toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆88Updated last week
- ☆51Updated 5 months ago
- Place to discuss the future design of a universal microscope hardware interface☆15Updated 4 years ago
- navigate - open source light-sheet microscope controls☆38Updated this week
- ☆36Updated last year
- A napari plugin for zarr backed OME-NGFF images☆38Updated 2 weeks ago
- Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy☆69Updated 3 weeks ago
- Browse your OMERO database from within napari.☆39Updated 3 weeks ago
- Archived: control, reconstruction, and analysis code for oblique plane microscopy.☆22Updated 6 months ago
- ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…☆80Updated last week
- 1d plotting in napari-based canvas.☆26Updated last week
- FIJI plugin for tracing of curvilinear structures in volumetric microscopy datasets☆30Updated last week
- Image reading, metadata management, and image writing for Microscopy images in Python☆104Updated last week
- Acquire: a multi-camera video streaming software focusing on microscopy☆22Updated 11 months ago
- User-affordable and versatile light-sheet microscopy system for cleared specimens☆25Updated 7 months ago
- A napari plugin for making animations☆90Updated 3 weeks ago
- Particle tracking by solving linear assignment problem.☆58Updated 2 weeks ago
- A napari plugin for clustering objects according to their properties.☆88Updated last week
- An automated point-set based registration algorithm for correlative light and electron microscopy (CLEM)☆19Updated this week
- Full-featured nd2 (Nikon NIS Elements) file reader for python. Outputs to numpy, dask, and xarray. Exhaustive metadata extraction☆70Updated last week
- Segment images utilizing pre-trained neural networks as feature extractors☆40Updated last week
- python tools for BigDataViewer☆22Updated 9 months ago
- Robust and unbiased estimation of the background distribution for fluorescence microscopy.☆12Updated 2 weeks ago
- Process and analyze surfaces using vedo in napari.☆24Updated last year
- A minimal dependency napari plugin giving access to scikit-image functions☆22Updated last month
- Denoising via adaptive binning.☆12Updated last year
- A napari plugin to load & deskew folders of lattice light sheet TIFFs☆13Updated 3 weeks ago