GUI interface between napari and micromanager powered by pymmcore-plus and pymmcore-widgets
☆75Mar 2, 2026Updated last week
Alternatives and similar repositories for napari-micromanager
Users that are interested in napari-micromanager are comparing it to the libraries listed below
Sorting:
- Pure python/C++ micro-manager ecosystem☆46Updated this week
- Python bindings for MMCore, Micro-Manager's device control layer☆35Updated this week
- An implementation agnostic schema for describing a sequence of events during a multi-dimensional imaging acquisition.☆20Feb 23, 2026Updated 2 weeks ago
- A set of Qt-based widgets onto the pymmcore-plus model☆20Mar 2, 2026Updated last week
- Pure Python Micro-Manager GUI Application, built on pymmcore-plus☆19Mar 2, 2026Updated last week
- ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of mu…☆82Updated this week
- Python control of micro-manager for customized data acquisition☆179Mar 1, 2026Updated last week
- Simple, fast-loading, n-dimensional array viewer with minimal dependencies.☆88Updated this week
- Multiple file format reading directly into napari using pure Python☆39Oct 15, 2025Updated 4 months ago
- ilastik plugin for napari☆14Mar 2, 2026Updated last week
- Place to discuss the future design of a universal microscope hardware interface☆15May 18, 2021Updated 4 years ago
- Image reading, metadata management, and image writing for Microscopy images in Python☆114Feb 25, 2026Updated last week
- N-dimensional, multiresolution file format for Micro-Manager☆14Sep 7, 2025Updated 6 months ago
- Interactive surface analysis in napari for bio-mechanical stress measurement☆18Mar 2, 2026Updated last week
- A Beginner's guide to microscopy, from sample prep to acquisition, image analysis, and data interpretation☆29Updated this week
- This repository is for the openFrame microscope and supporting projects☆12May 28, 2024Updated last year
- A 3D interactivity toolbox for napari☆37Jul 8, 2025Updated 8 months ago
- Acquire: a multi-camera video streaming software focusing on microscopy☆23Oct 30, 2024Updated last year
- A napari plugin for zarr backed OME-NGFF images☆45Mar 2, 2026Updated last week
- User-affordable and versatile light-sheet microscopy system for cleared specimens☆27Mar 14, 2025Updated 11 months ago
- ☆36Mar 22, 2024Updated last year
- Microscope control and image acquisition integrated with ImageJ☆297Updated this week
- A Python toolbox for registering / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆106Feb 11, 2026Updated 3 weeks ago
- napari plugin for trackastra☆17Nov 12, 2025Updated 3 months ago
- A napari plugin for stitching large multi-positioning datasets in 2/3D+t using multiview-stitcher☆17Updated this week
- GPU-accelerated general purpose image processing and image analysis in napari☆36May 1, 2025Updated 10 months ago
- Process and analyze surfaces using vedo in napari.☆25May 13, 2024Updated last year
- Segment images utilizing pre-trained neural networks as feature extractors☆47Feb 25, 2026Updated last week
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆63Oct 27, 2024Updated last year
- A minimalistic napari plugin to create and save regions of interest and annotations on series of images☆18Apr 8, 2025Updated 11 months ago
- GIve easy, high-level access to ome-zarr fileset☆22Sep 22, 2025Updated 5 months ago
- This is the repository for the openSIM project which integrates structured illumination microscopy into the UC2-system.☆12May 25, 2022Updated 3 years ago
- A basis for a napari plugin for manually correcting cell segmentation in 3D (z, y, x) or 4D (t, z, y, x) (virtual) arrays.☆10Mar 2, 2026Updated last week
- ☆13Jan 22, 2026Updated last month
- Spotiflow plugin for napari☆15Feb 2, 2026Updated last month
- A stable diffusion demo for napari☆11Dec 15, 2023Updated 2 years ago
- Create web-based OME-Zarr galleries☆22Nov 6, 2025Updated 4 months ago
- A minimal dependency napari plugin giving access to scikit-image functions☆23Sep 3, 2025Updated 6 months ago
- Linking napari layers with Matplotlib plots☆43Mar 1, 2026Updated last week