pFindStudio / pFind3
☆26Updated 2 months ago
Alternatives and similar repositories for pFind3:
Users that are interested in pFind3 are comparing it to the libraries listed below
- DEqMS is a tool for quantitative proteomic analysis☆23Updated last week
- MaxQuant with snakemake and singularity workflow for open and scalable mass spectrometry data analysis on Linux computing clusters☆26Updated 6 years ago
- Automated quantitative analysis of DIA proteomics mass spectrometry measurements.☆18Updated 3 months ago
- R package for analysing proteomics data☆49Updated 2 years ago
- ☆17Updated this week
- Examples of TMT data analyses using R. Links to notebooks and repositories. Also a few spectral counting analyses.☆22Updated 2 years ago
- Absolute quantification package based on quantms.io☆13Updated 2 months ago
- tidymass☆54Updated last year
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆33Updated 11 months ago
- A guide to running MaxQuant in Linux☆32Updated 5 years ago
- Pre-processing of mass spectrometry-based metabolomics data with quantification and identification based on MS1 and MS2 data.☆21Updated 2 months ago
- Identify and quantify MHC eluted peptides from mass spectrometry raw data☆34Updated 3 weeks ago
- Workshop illustrating mass spectrometry data analysis in R and use of the updated xcms functionality for the preprocessing of LC-MS data.☆27Updated last year
- Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Iso…☆42Updated last week
- Differential Expression Analysis tool box R lang package for omics data☆44Updated 3 weeks ago
- ☆58Updated 11 months ago
- Score an Affinity Purification Mass Spectrometry Proteomics Experiment for Interactor Confidence☆10Updated 9 years ago
- A Comprehensive R Package For Analyzing Quantitative Phosphoproteomics Data☆12Updated 2 years ago
- PepQuery: a targeted peptide search engine☆11Updated 11 months ago
- Docker for MetaboAnalyst 4.0☆24Updated 4 years ago
- Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.☆23Updated 6 months ago
- ☆24Updated 2 years ago
- The repo for LFQ-Analyst☆30Updated 8 months ago
- Picotti lab data analysis package.☆62Updated last week
- A global network optimization approach for untargeted LC-MS metabolomics data annotation and metabolite discovery☆46Updated last year
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆61Updated last month
- MS-DAP: downstream analysis pipeline for quantitative proteomics☆37Updated last month
- Construct database and identify metabolites.☆5Updated 2 years ago
- R package for functionally scoring phosphorylation sites☆19Updated 5 years ago
- TimsR: Easy access to timsTOF Pro data from R.☆10Updated 3 years ago