Chanjo provides a better way to analyze coverage data in clinical sequencing.
☆50May 8, 2026Updated 2 weeks ago
Alternatives and similar repositories for chanjo
Users that are interested in chanjo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- VCF visualization interface☆178Updated this week
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Dec 10, 2024Updated last year
- Genevieve client: using GenNotes, report ClinVar for individual genomes & add consensus notes☆10Aug 2, 2016Updated 9 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆31Feb 20, 2021Updated 5 years ago
- Tool to annotate outfiles from ExpansionHunter and TRGT with the pathologic implications of the repeat☆41Apr 22, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Annotate models of genetic inheritance patterns in variant files (vcf files)☆90Mar 27, 2026Updated last month
- conda recipes for genomic data☆84Jul 31, 2021Updated 4 years ago
- ☆19Apr 24, 2026Updated last month
- Mutation Identification Pipeline. Read the latest documentation:☆47Nov 18, 2025Updated 6 months ago
- Variant Annotation, Segregation and Exclusion for family or cohort based rare-disease sequencing studies.☆12Jun 2, 2022Updated 3 years ago
- Run bcbio-nextgen genomic sequencing analyses using isolated containers and virtual machines☆68Jun 3, 2020Updated 5 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19May 9, 2026Updated 2 weeks ago
- pythonic wrapper for libhts (moved to: https://github.com/quinlan-lab/hts-python)☆49Mar 3, 2017Updated 9 years ago
- a novel next-generation sequencing simulator using position and genomic contexts based error profiles☆13Dec 18, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A light-weight HTML lab notebook generator☆18Jun 16, 2023Updated 2 years ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- Call regions of homozygosity and make tentative UPD calls☆12Jun 27, 2025Updated 10 months ago
- Personal Cancer Genome Reporter (PCGR)☆277May 15, 2026Updated last week
- annotate a VCF with other VCFs/BEDs/tabixed files☆404May 1, 2026Updated 3 weeks ago
- Clin.iobio - Workflow and reporting for iobio variant analysis pipeline☆12Oct 7, 2025Updated 7 months ago
- structural variant database software☆48May 13, 2026Updated last week
- Import and run CWL workflows on DNAnexus (alpha)☆13Sep 12, 2018Updated 7 years ago
- Collection of notes and scripts related to NGS☆14Feb 18, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Generic Interactive Variant Analysis browser☆29Apr 12, 2022Updated 4 years ago
- Visualizing genetic sequence variation☆14Apr 27, 2020Updated 6 years ago
- Interpretable prioritization of splice variants in diagnostic next-generation sequencing☆18May 9, 2024Updated 2 years ago
- VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications☆93Oct 3, 2024Updated last year
- Filtering and profiling of next-generational sequencing data using region-specific rules☆79Oct 30, 2023Updated 2 years ago
- web-based analysis tool for rare disease genomics☆204Updated this week
- a lightweight db framework for exploring genetic variation.☆328Apr 28, 2020Updated 6 years ago
- Canvas - Copy number variant (CNV) calling from DNA sequencing data☆129Apr 20, 2026Updated last month
- Automated human exome/genome variants detection from FASTQ files☆23Sep 27, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Tool for the Automation of Cleanup and Analyses: tools for projects and data management at NGI Stockholm☆14Apr 29, 2026Updated 3 weeks ago
- Assembly Based ReAligner☆75May 24, 2018Updated 8 years ago
- classification of higher-order structural variants from breakpoint data☆11Jan 8, 2018Updated 8 years ago
- reference free variant assembly☆34Jul 14, 2023Updated 2 years ago
- A nextflow pipeline for calling exome CNVs☆14Updated this week
- VariantGrid public repo☆25May 18, 2026Updated last week
- Provides access to complex Bioinformatics software (even BioLinux!) in just one command.☆75Jun 28, 2017Updated 8 years ago