Python module utilizing libCZI for reading Zeiss CZI files.
☆48Jul 13, 2026Updated last week
Alternatives and similar repositories for aicspylibczi
Users that are interested in aicspylibczi are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A simple and easy-to-use Python wrapper for libCZI - a cross-platform C++ library intended for providing read and write access to CZI doc…☆31Jul 6, 2026Updated 2 weeks ago
- czi reader from https://www.lfd.uci.edu/~gohlke/code/czifile.py.html☆14Oct 15, 2025Updated 9 months ago
- Read Carl Zeiss image files (CZI).☆46Jun 13, 2026Updated last month
- libCZI is an Open Source Cross-Platform C++ library to read and write CZI.☆70Jul 13, 2026Updated last week
- Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python☆222Dec 1, 2025Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.☆34Aug 22, 2024Updated last year
- Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools a…☆169Jul 10, 2026Updated 2 weeks ago
- Open Source Cross-Platform C++ library to read CZI image files☆72Sep 30, 2022Updated 3 years ago
- Python module for registering and fusing multi-view microscopy data☆24Mar 8, 2025Updated last year
- Napari gaming☆17Dec 22, 2021Updated 4 years ago
- native Python dataclasses for the OME data model☆68Apr 2, 2026Updated 3 months ago
- Kaibu -- a progressive web app for visualizing and annotating multi-dimensional images.☆35Apr 4, 2025Updated last year
- Python based viewer for large mulit-dimensional datasets.☆20Jan 28, 2020Updated 6 years ago
- python tools for BigDataViewer☆23Jul 2, 2026Updated 3 weeks ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ImageJ/Fiji plugin to analyze 2D and 3D skeleton images☆28Jun 14, 2022Updated 4 years ago
- A Python toolbox for aligning / fusing / stitching large multi-view / multi-positioning image datasets in 2-3D.☆124Updated this week
- Tool for segmentation in bioimaging☆37Updated this week
- ☆15Apr 1, 2026Updated 3 months ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 5 years ago
- Create movies from series of key-frames in napari.☆38May 24, 2021Updated 5 years ago
- Interactive and integrated analysis of multiplexed tissue microarrays☆15Updated this week
- Paint segmentations directly to on-disk/remote zarr arrays☆16Mar 25, 2026Updated 3 months ago
- Read and write ImageJ ROI format.☆89Feb 11, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Visualizing feature measurements on label images in napari☆10Jul 24, 2024Updated 2 years ago
- Image reading, metadata management, and image writing for Microscopy images in Python☆126Jul 1, 2026Updated 3 weeks ago
- N-dimensional, multiresolution file format for Micro-Manager☆16Jun 17, 2026Updated last month
- ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration☆180May 14, 2026Updated 2 months ago
- mcib3d core library for 3D ImageJ suite☆16Oct 6, 2022Updated 3 years ago
- Track and lineage visualization with btrack and Napari☆45Sep 29, 2025Updated 9 months ago
- Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.☆56Nov 13, 2025Updated 8 months ago
- cupy-accelerated DIPY☆12Mar 16, 2021Updated 5 years ago
- A BaSiC Tool for Background and Shading Correction of Optical Microscopy Images☆67Mar 12, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Easily read and write ome-tiff images in python☆28May 6, 2024Updated 2 years ago
- Guide to python package development for scientists☆27Updated this week
- ☆15Feb 5, 2025Updated last year
- Python image segmentation plugin☆31Jan 13, 2021Updated 5 years ago
- Read and write life sciences file formats☆143Jun 12, 2025Updated last year
- Full Docs @ https://skalalab.github.io/flim_playground_doc/☆16Updated this week
- GPU-accelerated general purpose image processing and image analysis in napari☆36May 1, 2025Updated last year